Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq45237 89.7 3e-13 >seq45237 Length=73212453 Score = 89.7 bits (98), Expect = 3e-13 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216 |||||| ||||| | || ||||||||||| |||||||| |||||||| | | || Sbjct 10340762 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGACAAAGTACATCCATC 10340703 Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCC-TTCTTTT- 33274 |||| |||||| ||| ||| || | |||||| || | || || || ||||| | Sbjct 10340702 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTTCTTATC 10340643 Query 33275 -TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 | | | | ||| ||||| ||| ||| | || |||| ||| || || || || Sbjct 10340642 CTGGATCTTGGCC---TTTACATTTTCTATCATATCTGAAGGTTCAACCTCGAGGGTGAT 10340586 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || |||||||| ||||| |||||||| ||||| || Sbjct 10340585 GGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10340547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318538530248430