Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 6e-18
>seq1
Length=229942017
Score = 105 bits (116), Expect = 6e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | ||||||||||| ||||||||| |||| |||||||||
Sbjct 43407675 GGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 43407734
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| || || || || || | || |||||||| ||||| || ||||| ||||| || ||
Sbjct 43407735 CCCCAAGCTGAGAACCAAGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAAC 43407794
Query 128994 CTCAAAACGCT 129004
|| || || ||
Sbjct 43407795 CTGAAGACCCT 43407805
Score = 82.4 bits (90), Expect = 7e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163
|||| | ||||| |||||||||||||| ||||| |||||||||||||||||| | |||||
Sbjct 43410204 AGGCATCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACATAGAAGCCTACAT 43410263
Query 129164 GAC 129166
|||
Sbjct 43410264 GAC 43410266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447405995989200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |