Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-13
>seq1
Length=229942017
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTC 48573
||||| | || || ||| ||| || || |||||||| |||| | | ||| || | ||
Sbjct 221679908 AACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGTGGC-CATC 221679966
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
||||||||| || || | | || | ||||||||| || ||| | || ||||||||
Sbjct 221679967 CTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTC 221680026
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
|||||| |||| | | | ||||| || | | ||| ||| | || |||||
Sbjct 221680027 TTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 221680086
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| || ||||| || |||||||| ||||||||
Sbjct 221680087 TTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 221680119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420935279371535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |