Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq36523 100 7e-16
seq51122 96.9 9e-15
>seq36523
Length=132107971
Score = 100 bits (110), Expect = 7e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| || ||||| || || ||||||
Sbjct 66622073 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAAACAGGCACCCCGTATATG 66622014
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 66622013 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 66621954
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || ||||||
Sbjct 66621953 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 66621921
>seq51122
Length=156195299
Score = 96.9 bits (106), Expect = 9e-15
Identities = 149/212 (70%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || ||||| | |||| || | | | | |||
Sbjct 44959685 AAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAA 44959626
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
||| || | || || |||| || |||||| | |||||||| || | ||| | ||
Sbjct 44959625 CGTGTTGTAGCCTTCGCTGCAGTAGAAGGCGTCTTCTTTTCCGGTTCTTTTGCATCGATA 44959566
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|| ||||| || ||||| | | ||||| || || |||||||| ||||| | ||||||
Sbjct 44959565 TTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGC 44959506
Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
||||||||||| | || |||||||| ||
Sbjct 44959505 AGAGATGAGGGTTTACACTGTGATTTTGCTTG 44959474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302326013620370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |