Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq36523 100 7e-16 seq51122 96.9 9e-15 >seq36523 Length=132107971 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| || ||||| || || |||||| Sbjct 66622073 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAAACAGGCACCCCGTATATG 66622014 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||||||||| || || || ||| |||||||||| |||| || || || | Sbjct 66622013 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 66621954 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || |||||| Sbjct 66621953 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 66621921 >seq51122 Length=156195299 Score = 96.9 bits (106), Expect = 9e-15 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491 ||||| |||||||||||||| || ||||| | |||| || | | | | ||| Sbjct 44959685 AAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAA 44959626 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 ||| || | || || |||| || |||||| | |||||||| || | ||| | || Sbjct 44959625 CGTGTTGTAGCCTTCGCTGCAGTAGAAGGCGTCTTCTTTTCCGGTTCTTTTGCATCGATA 44959566 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 || ||||| || ||||| | | ||||| || || |||||||| ||||| | |||||| Sbjct 44959565 TTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGC 44959506 Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||||||||||| | || |||||||| || Sbjct 44959505 AGAGATGAGGGTTTACACTGTGATTTTGCTTG 44959474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302326013620370