Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq37270 104 2e-17 >seq37270 Length=136387465 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | ||||| || | || ||| | || |||||| ||| Sbjct 127297581 ATGCAGATCTTCGTGAAGACACTCACTGGCAAGACTATCACCCTTGAGGTCGAGCCCAGT 127297522 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | |||||| |||||| ||||| |||||||| ||||| || || Sbjct 127297521 GACACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 127297462 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||||| | | | | || || ||| Sbjct 127297461 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAC 127297402 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| ||||| Sbjct 127297401 ATCCAGAAAGAGTCTAC 127297385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | ||||| || | || ||| |||| || ||| ||| Sbjct 127298722 AATGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTGGAGCCCAG 127298663 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| |||||| || || |||||||| ||||| || || Sbjct 127298662 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCA 127298603 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| |||| | | ||| ||||| || ||||||| | | | | ||||| || Sbjct 127298602 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTGTCTGATTACAA 127298543 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 127298542 CATCCAGAAAGAGTCCAC 127298525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429613566137925