Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 4e-32
seq28484 140 3e-28
seq23159 134 1e-26
seq40942 118 9e-22
seq10472 118 9e-22
seq25851 111 1e-19
seq37270 102 7e-17
seq43713 100 2e-16
>seq1
Length=229942017
Score = 152 bits (168), Expect = 4e-32
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || ||||| || || | || || ||||| |||| ||||| || || |
Sbjct 221680123 AAACATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCGAGCC 221680064
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|| || ||| | || || ||||| ||||||||||||||||||||||| || || ||
Sbjct 221680063 CAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCGCCTGA 221680004
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| || ||||| |||||||| ||||||||| | |||||| || ||| |||| || ||
Sbjct 221680003 CCAGCAGCGTCTGATATTTGCTGGCAAACAGCTGGAGGATGGCCACACTCTCTCTGACTA 221679944
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||| || ||||| |||||| | || | || |||||
Sbjct 221679943 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCG 221679905
>seq28484
Length=135191526
Score = 140 bits (154), Expect = 3e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 39947516 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 39947457
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || |||| ||||||||||||||||||||||| ||||| || |
Sbjct 39947456 GTGACACCATTGAGAATGTCAATGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACC 39947397
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| |||||||||||||||||| | |||||| | |||| |||| || ||||
Sbjct 39947396 AGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACA 39947337
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||| | |||||
Sbjct 39947336 ACATCCAGAAACAGCCCACC 39947317
>seq23159
Length=157549271
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22206 TACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGA 22265
|||| || | ||||||| || ||||| || || | || || || || |||| || ||
Sbjct 58765814 TACAGATGCAGAGATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGA 58765873
Query 22266 AGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTAT 22325
|| || ||| || ||| || || |||| |||||||||||||||||||| ||
Sbjct 58765874 GGTCGAGCCCAGTGACACCACTGAGAATGTCAAGGCCAAAATTCAAGACAAGGAGGGCAT 58765933
Query 22326 TCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGT 22385
||||| || || |||||||| |||||||| ||||||||| | |||||| || |||| |
Sbjct 58765934 TCCACTTGACCAGCAACGTCTGATATTTGCGGGCAAACAGCTGGAGGATGACTGCACTCT 58765993
Query 22386 CTCCGATTACAACATTCAAAAAGAATCCA 22414
||| || | |||||| || ||||| ||||
Sbjct 58765994 CTCAGACTGCAACATCCAGAAAGAGTCCA 58766022
>seq40942
Length=108868599
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | | || || || |||| ||||| || | |||
Sbjct 58756434 AGATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCAAGCCCA 58756493
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| | | || ||||| |||||||| |||||||||||||| ||||| || |
Sbjct 58756494 CTGACACCATTTAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGTATCCCACCTGACC 58756553
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| |||||||| || |||||| | ||||| || ||| |||| | ||||
Sbjct 58756554 AGCAGCATCTGATATTTGCTGGGAAACAGCTGAAGGATGGCCACACTCTCTCAGGCTACA 58756613
Query 22397 ACATTCAAAAAGAATCCACCATA 22419
|||| || ||||| |||||| ||
Sbjct 58756614 ACATCCAGAAAGAGTCCACCCTA 58756636
>seq10472
Length=202140232
Score = 118 bits (130), Expect = 9e-22
Identities = 147/200 (74%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||| ||| || ||||| || || | || || || || | |||||||| || || | |
Sbjct 119681605 AGACGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATAACTCTTGAGGTCGAGCCAA 119681546
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || ||||| ||||||||||||||||||| ||| ||||| || |
Sbjct 119681545 GTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGG-TATCCCACCTGACC 119681487
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| ||| |||||||||||||| | |||||| || || |||| || ||||
Sbjct 119681486 AGCAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGTCGAACTCTCTCAGACTACA 119681427
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| | ||||| ||||||
Sbjct 119681426 ACATCCGGAAAGAGTCCACC 119681407
>seq25851
Length=153482349
Score = 111 bits (122), Expect = 1e-19
Identities = 93/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|||||||| ||||||||||| || ||||| || || || ||||| ||| |||| ||||||
Sbjct 130907157 AAAATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAGCGTCTGATACTTGCGGGCAAA 130907216
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| |||||| |||| || |||||||| || ||||| ||||||
Sbjct 130907217 CAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACC 130907270
>seq37270
Length=136387465
Score = 102 bits (112), Expect = 7e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || | || ||||| || || |||
Sbjct 127298038 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTAGAGCCCAG 127297979
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || ||||| ||| || || ||||||||||| ||||| || |||||
Sbjct 127297978 TGACACCATTGAGAATGTCAAAGCAAAGATCCAGGACAAGGAGGGCATTCCTCCTGATCA 127297919
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | | || ||||| || || ||| | || ||| |||||| |||| || |||||
Sbjct 127297918 GCAAAGGTTGATCTTTGCGGGAAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAA 127297859
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| || |||
Sbjct 127297858 CATCCAGAAAGAGTCTACC 127297840
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || ||||| || |||| || || ||||| |||
Sbjct 127298721 ATGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTGGAGCCCAGT 127298662
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||| || ||||| ||||| || || || || || ||
Sbjct 127298661 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 127298602
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| | || ||| |||||| | || |||||||||
Sbjct 127298601 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTGTCTGATTACAAC 127298542
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| ||||||
Sbjct 127298541 ATCCAGAAAGAGTCCACC 127298524
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || |||| || || ||||| |||
Sbjct 127297126 GATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 127297067
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || ||||||||||| || ||||| || || ||
Sbjct 127297066 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCA 127297007
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || |||||| | || ||| |||||| | || || |||||
Sbjct 127297006 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 127296947
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||| || ||||| ||||| | || || || |||| ||
Sbjct 127296946 CATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTT 127296908
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || |||| || || ||||| |||
Sbjct 127298494 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 127298435
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || ||||||||||| || ||||| || || ||
Sbjct 127298434 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCA 127298375
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| || ||| | || ||| |||||| | || ||||||||
Sbjct 127298374 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTGTCTGATTACAA 127298315
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| || |||
Sbjct 127298314 CATCCAGAAAGAGTCTACC 127298296
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || |||| ||||| || || |||
Sbjct 127297582 GATGCAGATCTTCGTGAAGACACTCACTGGCAAGACTATCACCCTTGAGGTCGAGCCCAG 127297523
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || ||||| ||| || ||||||||||| || || || || || ||
Sbjct 127297522 TGACACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 127297463
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| || ||| | || ||| |||||| | || || |||||
Sbjct 127297462 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 127297403
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| || |||
Sbjct 127297402 CATCCAGAAAGAGTCTACC 127297384
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || ||||| || ||||||| || ||||| | |
Sbjct 127297810 GATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACTCTCGAGGTGGAGCCTAG 127297751
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || | |||| ||| || ||||||||||| || ||||| || || ||
Sbjct 127297750 TGACACTATTGAGAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCA 127297691
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || |||||| | || ||| |||||| | || || |||||
Sbjct 127297690 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 127297631
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || ||||| |||||
Sbjct 127297630 CATCCAGAAAGAGTCCAC 127297613
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || |||||||||| || || | |
Sbjct 127298266 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGCCTAG 127298207
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || | |||| ||| || || ||||||||||| ||||| || || ||
Sbjct 127298206 TGACACTATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 127298147
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| |||||| | || ||| |||||| | || ||||||||
Sbjct 127298146 GCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGCACCCTGTCTGATTACAA 127298087
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || ||||| || ||
Sbjct 127298086 CATCCAGAAAGAGTCTAC 127298069
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 22292 ATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATAT 22351
|| ||||| ||||| |||||||||||||| || | || || || || |||| ||||
Sbjct 117603089 ATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCTGCCTGACCAGCAGTGTCTGATAT 117603030
Query 22352 TTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAAT 22411
||| ||||||||| | |||||| || || |||| || || ||||| || ||||| |
Sbjct 117603029 TTGTGGGCAAACAGCTGGAGGATGGCCACAGTCTCTCAGACTAGAACATCCAGAAAGAGT 117602970
Query 22412 CCACC 22416
|||||
Sbjct 117602969 CCACC 117602965
>seq43713
Length=77800216
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 35284626 AGATGTGGATCTTTGTGAAGACCCTCACAGGCAATACCATCACCCTTGAGGTCGAGCCCA 35284567
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
||| || || || ||||| ||||||||||||||| |||| || | ||| || |
Sbjct 35284566 GTGATGCCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGTAGGGCATCCTACCTGACC 35284507
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| |||||| ||||||||| | ||||| || ||| ||| || ||||
Sbjct 35284506 AGCAGTGTCTGATATTTCAGGGCAAACAGCTGAAGGATGGCCACACACTCTTAGACTACA 35284447
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 35284446 ACATCCAGAAAGAGTCCACC 35284427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419413221707275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |