Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 6e-19
>seq1
Length=229942017
Score = 109 bits (120), Expect = 6e-19
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| || |
Sbjct 43407673 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 43407732
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| || ||||| ||||| ||||| || ||| || ||||| || || |||| || |
Sbjct 43407733 TGCCCCAAGCTGAGAACCAAGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGA 43407792
Query 9981 ATCTAAAGACCCT 9993
| || ||||||||
Sbjct 43407793 ACCTGAAGACCCT 43407805
Score = 95.1 bits (104), Expect = 1e-14
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || ||||| || |||||||||||||| || |||||||| || || |||||||
Sbjct 43410191 AGCTCCAAGAGAAAGGCATCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACA 43410250
Query 10140 TAGAAGCATACATGACAATTAA 10161
||||||| ||||||||||| ||
Sbjct 43410251 TAGAAGCCTACATGACAATGAA 43410272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552291657146400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |