Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq42212 132 1e-25 seq45237 129 1e-24 seq45999 123 6e-23 seq25851 120 7e-22 seq1 120 7e-22 seq37270 118 2e-21 seq23159 104 6e-17 seq39385 100 7e-16 seq28484 98.7 2e-15 seq51122 95.1 3e-14 seq20726 93.3 1e-13 seq49093 87.8 4e-12 >seq42212 Length=99152023 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || ||||| ||||| ||||| | Sbjct 87790063 CCACCACTAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 87790122 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||||| || || || || |||||||| | ||| ||| | || Sbjct 87790123 AAAGTACGTCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 87790182 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 87790183 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 87790242 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || | ||| ||||||||| || Sbjct 87790243 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCATTTTG 87790293 >seq45237 Length=73212453 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 16727739 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 16727680 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||||||||| ||||| || || ||||| ||| Sbjct 16727679 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTT 16727620 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 16727619 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 16727560 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 16727559 AAGATCTGCAT 16727549 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 16727511 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAG 16727452 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || || || ||||||||||||||||| || || ||||| ||| Sbjct 16727451 ATGAGCCTCTGCTGGTCGGGAGGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTT 16727392 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 16727391 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 16727332 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 16727331 AAGATCTGCAT 16727321 Score = 111 bits (122), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| | || | ||||| || |||||||| ||||| ||| | | Sbjct 10340776 CCACCACGCGGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGAC 10340717 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||| || || || |||||| | | || ||| | || Sbjct 10340716 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 10340657 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||| ||||||||||| || || || || |||||||| ||| | ||| || Sbjct 10340656 ATTCCTTTCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCTGAAGGTTCAACC 10340597 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 10340596 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10340546 Score = 105 bits (116), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || || || || ||||| | || || ||||| ||| Sbjct 16727283 TCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAG 16727224 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || || ||| || ||||| ||||||||||| || || ||||| Sbjct 16727223 ATGAGCCTCTGCTGG---TCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 16727167 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || || | || || || || ||||| ||||| || || || || || Sbjct 16727166 TTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTC 16727107 Query 288460 ACGAATATCTGCATTATG 288477 ||||| ||||||||| || Sbjct 16727106 ACGAAGATCTGCATTTTG 16727089 >seq45999 Length=10578 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 9240 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 9181 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| ||| ||||| ||||||||||||||||| || |||||||| ||| Sbjct 9180 ATGAGCCTCTGCTGATCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCTTTCACATTT 9121 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 | || | || || | || || || || || || ||||| |||||||| ||||| || Sbjct 9120 TTGATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCGGTCAGGGTCTTCACA 9061 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 9060 AAGATCTGCAT 9050 Score = 122 bits (134), Expect = 2e-22 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | | || ||||| ||| Sbjct 8784 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTACTTGCCTGCAAAG 8725 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTC-CTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||| || | | |||| | ||||||||||||||||||| || ||||| || Sbjct 8724 ATGAGCCTCTGCTG-GTCGCGGGGAATGTCTTCTTTATCCTGGATTTTGGCCTTCACATT 8666 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || | || ||||| || ||||| ||||| ||||| || || || || Sbjct 8665 TTCGATGGTGTCACTGGGCTCCACTTCTAGGGTGATGGTCTTGCCGGTAAGGGTTTTCAC 8606 Query 288462 GAATATCTGCATTATG 288477 ||| ||||||||| || Sbjct 8605 GAAGATCTGCATTTTG 8590 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||| | || || | || ||||| | || || ||||| ||| Sbjct 9012 TCCTTCTGGATGTTGCAGTCAGAAAGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAG 8953 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||||||||| || || ||||| ||| Sbjct 8952 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTT 8893 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || ||||| || ||||| ||||| |||||||| ||||| ||| Sbjct 8892 TCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACG 8833 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 8832 AAGATCTGCAT 8822 >seq25851 Length=153482349 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || ||||| ||||| ||||| | Sbjct 83238644 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 83238585 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | || || || || |||||||| | ||| ||| | || Sbjct 83238584 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATGAGGAGGA 83238525 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| ||| | ||| || Sbjct 83238524 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAACC 83238465 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | ||| ||||| |||||||| | || || || | ||| ||||||||| || Sbjct 83238464 TTGAGGGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 83238414 >seq1 Length=229942017 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | ||||||| || || ||||| ||||| ||||| | Sbjct 142062284 CCACCACGAAGTCTCA-----AGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 142062338 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | || || || || |||||||| | | | ||| | | Sbjct 142062339 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCCGCTGATCAGGAAGA 142062398 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 142062399 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCGACC 142062458 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 142062459 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 142062509 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | ||||||| || || ||||| ||||| ||||| | Sbjct 142066355 CCACCACGAAGTCTCA-----AGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 142066409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | || || || || |||||||| | ||| ||| | | Sbjct 142066410 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAAGA 142066469 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | || || Sbjct 142066470 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTTGACC 142066529 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 142066530 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 142066580 Score = 105 bits (116), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||| | || ||||||| || | ||||| ||| Sbjct 31920912 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGAGGCCATCTTCTAGCTGCATGCCTGCAAAG 31920853 Query 288343 ATCAGACGCTGTTGAGAATCTGGGA---TTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || || |||| | ||||| ||||||||||| || || ||||| Sbjct 31920852 ATGAGCCTCTGCTGG---TCGGGGAGGATGCCTTCCTTATCCTGGATATTGGCCTTCACA 31920796 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 |||| || | || || | || || || || ||||| ||||| || ||||| ||||| Sbjct 31920795 TTTTTGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 31920736 Query 288460 ACGAATATCTGCATTATG 288477 || || ||||||||| || Sbjct 31920735 ACAAAGATCTGCATTTTG 31920718 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | ||| ||| | || || || | ||||| || || || Sbjct 221679929 TCTTTCTGGATGTTGTAGTCAGAGAGAGTGTGGCCATCCTCCAGCTGTTTGCCAGCAAAT 221679988 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | ||||| || || || || || ||||| ||||| || || Sbjct 221679989 ATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTC 221680048 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| || || || || || ||||| || Sbjct 221680049 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACA 221680108 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 221680109 AAGATCTGCAT 221680119 >seq37270 Length=136387465 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || || | ||| ||||| ||||| || || || | Sbjct 127298495 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAC 127298554 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| || ||||||| | ||| || | ||| Sbjct 127298555 AGGGTGCGACCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 127298614 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| ||||| || || || || || || || | || || | || || Sbjct 127298615 ATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 127298674 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct 127298675 TCGAGGGTGATGGTCTTACCAGTCAGAGTCTTCACGAAGATCTGCATT 127298722 >seq23159 Length=157549271 Score = 104 bits (114), Expect = 6e-17 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 155362259 CCACCACGAAGTCTCAACACAAGATGAAGGGTAAGCTCCTTTTGAATGTTGTAGTCAGAC 155362200 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || | | ||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 155362199 AG--TACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 155362142 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 155362141 ATTCCCTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACC 155362082 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | ||| |||| |||||||| || | || || | ||| ||||||||| || Sbjct 155362081 TTGAGGATGATGGTCTTCCCTGTAAAGGTTTTTATGAAAATCTGCATTTTG 155362031 >seq39385 Length=18041 Score = 100 bits (110), Expect = 7e-16 Identities = 139/191 (73%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| |||||||| | || ||| | | ||||| | || || |||| ||||| Sbjct 8939 CTTTCTGGATTTTATAGTCAGAAAGAGTGTGGACATCTTCCAGCTGCTTGCCTGTGAAGA 8880 Query 288344 TCAGACGCTGTTGAGAATCTGGG--ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 | || | ||| ||| |||||| || |||||||||||||||| || | |||||| || Sbjct 8879 TGAGCCTCTGCTGA---TCTGGGGGATGTCTTCTTTATCCTGGATCTT-GGTTTCACATT 8824 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || || || ||||| || || |||| ||||| || || || ||||| || Sbjct 8823 TTCAATGCTGTCACT---GTCTACCTCCAGGGTGACAGTCTTGCCAGTGAGGGTCTTCAC 8767 Query 288462 GAATATCTGCA 288472 ||| ||||||| Sbjct 8766 GAAGATCTGCA 8756 >seq28484 Length=135191526 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| | ||| ||||| || ||||| | | Sbjct 39947288 CCACCTCGCAGGCACAGCACCAGGTGCAGGGTGGGCTGTTTCTGGATGTTGTAGTCTGAG 39947347 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||| || || || | ||||| || || || ||||||||||| || | |||| Sbjct 39947348 AGAGTGCAGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 39947407 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| || || || || || || | || || | || || Sbjct 39947408 ATACCCTCCTTGTCTTGAATTTTGGCATTGACATTCTCAATGGTGTCACTGGGCTCGACC 39947467 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||| || || |||||||| Sbjct 39947468 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 39947514 >seq51122 Length=156195299 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || |||| | | || ||||| ||||| | ||| || || || ||| Sbjct 3370904 TCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAG 3370845 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| | | |||||||| ||||||||||| || || || || ||| Sbjct 3370844 ATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 3370785 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||||| | ||| | ||| | || || ||||| |||||||| | || || || ||| Sbjct 3370784 TCTATCGCATCTGAGGGTTCAGCCTCAAGGGTGATGGTCTTCCCCCTTAGGGTTTTCACG 3370725 Query 288463 AATATCTGCA 288472 || ||||||| Sbjct 3370724 AAAATCTGCA 3370715 >seq20726 Length=174210431 Score = 93.3 bits (102), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||| | | || | ||||| || || ||||| ||| | ||||| | Sbjct 115806506 CCACCACGAAGTTTCAACACAAAATGAAGAGTAGACTCCTTTTGAATACTGTAGTCAGAC 115806447 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 115806446 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 115806387 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| ||| | ||| | Sbjct 115806386 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCAAGGTTTCAGCC 115806327 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | ||| ||||| |||||| | || | | | || || || ||||||||| || Sbjct 115806326 TTGAGGGTGATGGTCTTCTCTGTAAAACTTTTCACAAAAATCTGCATTTTG 115806276 >seq49093 Length=62736349 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||| | ||| || || || ||||| || | || ||| | || |||||||| ||| Sbjct 34352581 TCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 34352522 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || | ||||| |||||| | ||| | ||| || ||||| ||||| Sbjct 34352521 TCCTGGATCTTGGTCTTCACATTTTCTGTCATATCCGAGGGTTCAACCTCGAGGGTGATG 34352462 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || || || || ||||| ||||||||| Sbjct 34352461 GTTTTCCCTGTAAGGGTTTTCACGAAAATCTGCATT 34352426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178724340195730