Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
seq37270 84.2 2e-11
>seq1
Length=229942017
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
|||||| || ||||| || || || || ||||| || || || || || | |||
Sbjct 221679907 CAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGTGGCCATC 221679966
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
|||| ||||| || || |||||| || |||||||| ||||| || || || || ||
Sbjct 221679967 CTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTC 221680026
Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307
||||||||| ||||| || | |||||| | |||||| || || || | ||
Sbjct 221680027 TTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 221680086
Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || || || || ||||| || |||||
Sbjct 221680087 TTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 221680119
>seq37270
Length=136387465
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || ||||| || || || || ||||| || ||||| | ||| | ||| ||
Sbjct 127298284 CACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCTTC 127298343
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| || ||||| || | ||||| | |||||||| || ||||||||||| || |||||
Sbjct 127298344 CAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTG 127298403
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| ||| |||| || | |||||| | ||| || ||||| || | || ||
Sbjct 127298404 GATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTT 127298463
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| || || || || || || || ||||||
Sbjct 127298464 GCCAGTCAGGGTCTTCACGAAGATCTGCATC 127298494
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || ||||| || || || || ||||| || || || | ||| | ||| ||
Sbjct 127297600 CACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTC 127297659
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| ||||| || || | ||||| | |||||||| || ||||||||||| || |||||
Sbjct 127297660 CAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTG 127297719
Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
|| ||| |||| || | || | ||||| || ||| || |||||||| | || |
Sbjct 127297720 GATCTTTGCCTTGA-CGTTCTCAATAGTGTCACTAGGCTCCACCTCGAGAGTGATGGTCT 127297778
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || || || || || ||||||
Sbjct 127297779 TACCAGTCAGGGTCTTCACGAAGATCTGCATC 127297810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451655524788600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |