Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 7e-25
seq45237 123 3e-23
seq45999 113 5e-20
seq28484 111 2e-19
seq42212 98.7 1e-15
seq25851 96.9 4e-15
>seq1
Length=229942017
Score = 129 bits (142), Expect = 7e-25
Identities = 162/221 (73%), Gaps = 1/221 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||||||||| |||| || ||| || ||||| |||||||| || |||||| | |
Sbjct 221679905 CGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGTGGCCA 221679964
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||| ||||| || ||||||| ||||||||||| | ||| | | |||||||
Sbjct 221679965 TCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTG 221680024
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
|| || || |||| || | | ||||| || | || || || | ||||||
Sbjct 221680025 TCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 221680084
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598
||||||||||| || || || |||||||| ||||| |||||
Sbjct 221680085 GTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTTGC 221680125
Score = 102 bits (112), Expect = 9e-17
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 46372 TCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGT 46431
||| | |||| ||||| |||| || ||| || ||||| |||||||| || |||||
Sbjct 31920943 TCTCAGACGCTGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGT 31920884
Query 46432 GCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491
| | | || || |||||| |||| || || || | | ||||||||||| | | ||
Sbjct 31920883 GAGGCCATCTTCTAGCTGCATGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGAGGATGCC 31920824
Query 46492 CTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCAC 46551
||||| ||| ||| || ||| | | | ||||| || | ||||| || |
Sbjct 31920823 TTCCTTATCCTGGATATTGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCAAG 31920764
Query 46552 CGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|||||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 31920763 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTTG 31920718
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447
||||| | ||| ||||||||| ||||||||||| || | ||| || | || || |||
Sbjct 142062300 AGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGC 142062359
Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507
|||||||| || || |||| | | |||| || | | | | ||||| ||| ||||
Sbjct 142062360 TGCTTGCCAGCAAAGATCAGTCTCCGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATC 142062419
Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567
|| ||| | | | | ||| || | ||| || || | |||||||| || |||
Sbjct 142062420 TTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCGACCTCGAGGGTGATGGTCTTCCCC 142062479
Query 46568 GTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| || ||||| || || || |||||||||
Sbjct 142062480 GTAAGGGTTTTCACGAAAATCTGCATTTTG 142062509
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447
||||| | ||| ||||||||| ||||||||||| || | ||| || | || || |||
Sbjct 142066371 AGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGC 142066430
Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507
|||||||| || || |||| | |||||| || | | | | ||||| ||| ||||
Sbjct 142066431 TGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATC 142066490
Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567
|| ||| | | | | ||| || | || || || | |||||||| || |||
Sbjct 142066491 TTGGCCTTTACATTTTCTATCGTATCCGAGGGTTTGACCTCGAGGGTGATGGTCTTCCCC 142066550
Query 46568 GTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| || ||||| || || || |||||||||
Sbjct 142066551 GTAAGGGTTTTCACGAAAATCTGCATTTTG 142066580
>seq45237
Length=73212453
Score = 123 bits (136), Expect = 3e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||||| ||||| |||| || ||| || ||||| |||||||| ||
Sbjct 16727319 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 16727260
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || ||||||||||| || || || | | ||||||||||| ||
Sbjct 16727259 AGAGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 16727200
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||| ||| |||||| ||| | | | | ||||| || | |||||
Sbjct 16727199 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 16727140
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| | |||||||| ||||| || || ||||| || ||||| |||||||||
Sbjct 16727139 TCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAGATCTGCATTTTG 16727089
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| |||| || |||||| ||||| |||||||| ||
Sbjct 16727547 CCACCTCTCAGACGTAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 16727488
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|||||||| | || || ||||||||||| || || || | | ||||||||||| ||
Sbjct 16727487 AGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGA 16727428
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || || || ||| |||||| ||| | | | | ||||| || | |||||
Sbjct 16727427 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 16727368
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| ||||| || || || ||||| |||||
Sbjct 16727367 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 16727321
Score = 105 bits (116), Expect = 8e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || || | |||| ||||| |||| || ||| || ||||| |||||||| ||
Sbjct 16727776 GCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGA 16727717
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|||||||| | || || ||||||||||| || || || | | ||||||||| | ||
Sbjct 16727716 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGG 16727657
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| || || || || |||||| ||| | | | | ||||| || | |||||
Sbjct 16727656 GATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 16727597
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| ||||| || || || ||||| |||||
Sbjct 16727596 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 16727549
>seq45999
Length=10578
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||||| ||||| ||||| || |||||| ||||| ||| |||| ||
Sbjct 9048 CCACCTCTCAGACGCAGGACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGCAGTCAGAA 8989
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| | | || || ||||||||||| || || || | | ||||||||||| ||
Sbjct 8988 AGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 8929
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || || || ||| |||||| ||| | | | | ||||| || | |||||
Sbjct 8928 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 8869
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||||| || ||||| ||||| || || || ||||| |||||
Sbjct 8868 TCCAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 8822
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || || | |||| ||||| |||| || ||| || ||||| |||||||| ||
Sbjct 9277 GCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGA 9218
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|||||||| | || || ||||||||||| || || || | | |||||| |||| ||
Sbjct 9217 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGGGGGG 9158
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| || || || ||| |||||| || | | | ||||| || | |||||
Sbjct 9157 GATGCCTTCTTTATCCTGGATCTTGGCTTTCACATTTTTGATGGTGTCACTGGGCTCCAC 9098
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct 9097 CTCCAGGGTAATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 9050
>seq28484
Length=135191526
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| | | || |||||| |||| || || || ||||| |||||||| |
Sbjct 39947286 TGCCACCTCGCAGGCACAGCACCAGGTGCAGGGTGGGCTGTTTCTGGATGTTGTAGTCTG 39947345
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| ||||||| | || || ||||| |||||||| ||||||| ||||||||||| | |
Sbjct 39947346 AGAGAGTGCAGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTG 39947405
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | ||||||||| || || |||| || | | ||||| || | || |
Sbjct 39947406 GGATACCCTCCTTGTCTTGAATTTTGGCATTGACATTCTCAATGGTGTCACTGGGCTCGA 39947465
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| |||||||| || || || |||||||| |||||
Sbjct 39947466 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 39947514
>seq42212
Length=99152023
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||| ||||| | ||| ||||||||| ||||||||||| || | ||| || | ||
Sbjct 87790077 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 87790136
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| ||||||||||| || || |||| | |||||| || | || | | ||||| ||
Sbjct 87790137 TTCTAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 87790196
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | | ||| || | ||| || || | ||||||||
Sbjct 87790197 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 87790256
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| ||||| || ||||| | || || |||||||||
Sbjct 87790257 CTTCCCCGTAAGGGTTTTCATGAAAATCTGCATTTTG 87790293
>seq25851
Length=153482349
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/229 (70%), Gaps = 18/229 (8%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| | |||| |||||| |||| || ||| || ||||| |||||||| |
Sbjct 130907301 TGCCACCTCACAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTG 130907242
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || ||||| ||||| || | ||||| ||||||||||| | |
Sbjct 130907241 AGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAGTATCAGACGCTGCTGGTCAGGTG 130907182
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||||||| ||| | ||| |||| || || |||| ||
Sbjct 130907181 GGATGCCCTCCTTGTCC-TGA-----ATTTTG-GCGTTGC-----TG-GGCTCAAT---- 130907139
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||||| ||||| || || || || |||||||| |||||
Sbjct 130907138 -CTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 130907091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564803625688200
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