Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13964 113 5e-20 >seq13964 Length=198332218 Score = 113 bits (124), Expect = 5e-20 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931 || ||||||||||||||||| || |||| || |||||| ||||| || | || ||| Sbjct 63407686 ATCATGATTACATACCCATCCACCAATGGGGTGTTTGAAGAGAACATCAGTGACATGTGT 63407627 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 | || | ||| | |||| || ||||| || || ||||| |||||| | || || ||| Sbjct 63407626 GACCTCATCCATCAACATGGAGGACAGGTCTACCTAGATGGGGCAAATATGAACGCTCAG 63407567 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || ||| | | || | || | ||| | ||||| | || ||||| | || || Sbjct 63407566 GTGGGAATCTGTCACCCTGGAGACTTTGGGTCTGATGTCTCGCACCTAAATCTTCACAAG 63407507 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAA 155111 || ||||| |||| || ||||| || ||||||||| | || || || || || ||| Sbjct 63407506 ACCTTCTGCTTTCCCCACGGAGGAGGTGGTCCTGGCATGGGGCCCATCGGAGTGAAGAAA 63407447 Query 155112 CATCTCACACCATTT 155126 ||||| | |||||| Sbjct 63407446 CATCTTGCCCCATTT 63407432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578767276754400