Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13964 116 4e-21 >seq13964 Length=198332218 Score = 116 bits (128), Expect = 4e-21 Identities = 181/257 (70%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||||||||| ||||| || |||| || |||||| |||||||| | || ||| Sbjct 63407686 ATCATGATTACATACCCATCCACCAATGGGGTGTTTGAAGAGAACATCAGTGACATGTGT 63407627 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | ||| | |||| || ||||| || || ||||| |||||| | || || ||| Sbjct 63407626 GACCTCATCCATCAACATGGAGGACAGGTCTACCTAGATGGGGCAAATATGAACGCTCAG 63407567 Query 159667 GTAGG--TCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 || || ||| | | || | |||| ||| | ||||| | || ||||| | || | Sbjct 63407566 GTGGGAATCTGTC--ACCCTGGAGACTTTGGGTCTGATGTCTCGCACCTAAATCTTCACA 63407509 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA 159784 |||| ||||| |||| || ||||| || ||||||||| | || || || || || | Sbjct 63407508 AGACCTTCTGCTTTCCCCACGGAGGAGGTGGTCCTGGCATGGGGCCCATCGGAGTGAAGA 63407449 Query 159785 AACATCTCACACCATTT 159801 ||||||| | |||||| Sbjct 63407448 AACATCTTGCCCCATTT 63407432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587598878367600