Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq1 120 4e-22 >seq1 Length=229942017 Score = 120 bits (132), Expect = 4e-22 Identities = 194/277 (70%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 197371 GGATCCGTGGGAGGTTTCGCCAGTTTTCCGCTAAATATCTCAAACGCGACAGATATTGAG 197430 |||||| ||| |||| | | ||| || |||||||||||| | ||||| |||||| Sbjct 90557716 GGATCCTAGGG-GGTTCTGTGACTTTCCCCCTAAATATCTCAGTAGACACAGAGATTGAG 90557658 Query 197431 AACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCTAAAG---ACGTT 197487 |||| |||| || || |||| ||| | || || || ||| |||| | || Sbjct 90557657 CACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA 90557598 Query 197488 ACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACCAACTACTCTTTG 197547 ||| | |||| |||||||||| ||| || | |||| | | || ||||| || Sbjct 90557597 ACCGTTATGGTCAAAAGCTACCTGGGCCGACTAGACATCACTAAGTGGAATTACTCCCTG 90557538 Query 197548 TGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAAATTAACAAAAAT 197607 ||||| || || ||||| |||||||||| || || || || ||||| || ||| ||| Sbjct 90557537 TGCATCAGAAATCTGACTCTGAATGATGCAGGATCCTACAAAGCCCAGATAAACCAAAGG 90557478 Query 197608 AATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGT 197644 |||| |||||||||| |||||||||| || |||| Sbjct 90557477 AATTTTGAAGTCACCACTGAGGAGGAATTCACCCTGT 90557441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701648685152400