Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq47930 93.3 1e-14
>seq47930
Length=60714840
Score = 93.3 bits (102), Expect = 1e-14
Identities = 187/273 (68%), Gaps = 11/273 (4%)
Strand=Plus/Plus
Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017
|||| | ||| |||||||| ||| ||||||| ||||| || || || || || |
Sbjct 53956676 TTCCTTCTGGGTGTTATGG-AGAGTAGCTCCAAGGTCTGGCTTGGCTGCAAAACACTTTG 53956734
Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077
||||||| | |||||||| | ||| ||| | ||| || || ||||||||||| | |
Sbjct 53956735 TTGATGTAGTAGCTGGTGTCACAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTCT 53956794
Query 1078 TTAATTTTAGC-GATAAGCGTTT----TCATATTTCAAGAGGTGATAGGATTGCTCAGTT 1132
|||||||| || | || |||| ||| | || ||||||| | || || ||| |
Sbjct 53956795 TTAATTTTGGCAAAGAAAAGTTTGAAGTCAAA----AAAAGGTGATCGAATCGCACAGCT 53956850
Query 1133 AATTTGTGAAAAGGCTGTTTT-TCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGG 1191
||||||||| | | |||| |||| | || | || | | || || || |
Sbjct 53956851 CATTTGTGAACGGATTTTTTTATCCAGAAAGAGAAGTTGTTCAAGCTTTGGATGACACCA 53956910
Query 1192 AAAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224
|||||||||| | ||| ||||| ||||| ||||
Sbjct 53956911 AAAGGGGTTCAGGAGGTTTTGGTTCTACTGGAA 53956943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138580261454460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |