Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq10472 138 1e-27 >seq10472 Length=202140232 Score = 138 bits (152), Expect = 1e-27 Identities = 190/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 || || ||| | | |||||| || ||| | |||| ||| | | |||||||| ||||| Sbjct 20503690 CCTGCTTCCTTAAAATGCTCTCTGCAAAATGCACAGGAAGCCCTCATTGTAACATGGCAG 20503631 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || |||||||||||| | |||||||| |||| ||| | ||| | ||| || || ||| Sbjct 20503630 AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACCTTCAGCGAGAACCATGGGGTGGTG 20503571 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 | ||||| | |||||||| | || || || ||| | | || || |||| | Sbjct 20503570 ATCCAGCCTGCCTATAAAGACAAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACC 20503511 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| || ||||| |||||||| ||||| |||||||| || |||| Sbjct 20503510 ATCACCTTCTGGAATATCACCCTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACC 20503451 Query 153985 TTCGGTTCTGGTAAGGTATCGGGAAC 154010 || |||| ||| ||| | || ||||| Sbjct 20503450 TTTGGTTTTGGGAAGATCTCAGGAAC 20503425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648799767171600