Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq45237 84.2 2e-11 >seq45237 Length=73212453 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || || || ||||| | ||||| || ||||| ||| ||| |||||| Sbjct 10340547 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCT 10340606 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| | | | | || | ||| || ||| || || | ||| | || ||| Sbjct 10340607 TCAGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGAAAGGAATTCCTCCTGAT 10340666 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || |||| |||||||| ||||| ||| |||||||| ||| || | | || Sbjct 10340667 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGGCTAC 10340726 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGA 28769 || ||||||||||| |||||||| || | || || ||| Sbjct 10340727 AATATTCAAAAAGAGTCTACTCTTCATTTTGTGTTGAGA 10340765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425085764346765