Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq28484 300 2e-76
seq10472 176 5e-39
seq18647 116 4e-21
>seq28484
Length=135191526
Score = 300 bits (332), Expect = 2e-76
Identities = 668/993 (67%), Gaps = 17/993 (2%)
Strand=Plus/Minus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
|||| || ||| || |||| ||| |||| ||| || | |||||| || |||| || |||
Sbjct 71460290 TGTCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAACTTA 71460231
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || |||| ||||| || | || ||||||| || ||| || | ||||| | |
Sbjct 71460230 TTGGCAAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCGAAAATG 71460174
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
|| || || || | || || || | ||| || ||||| |||| || || | || |||
Sbjct 71460173 CACACTGAGCGCACATGGACTCCATCGCAGGGTGGGTAGGGAGCACCCTTGGAAACATCA 71460114
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
|| || ||||||||||||| ||||||||||| | || |||||||| || || ||
Sbjct 71460113 CCCTCAAAGTACTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCATAC 71460054
Query 160287 TTGTACAT--CAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344
|| | | ||| | || |||||| | | || || | || | ||||||||| |
Sbjct 71460053 TTATGGCTGGCAGAGAGTGAGC-CCGGGA-CTTCAGGAATCCTTTGGATGGTGGCCCAGA 71459996
Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGT 160404
| | || || ||||| || ||||| | | ||| ||||| |||| | |||| |
Sbjct 71459995 GATACTCATCAGGGCTATATGTGTCTTGTGCCCACTCCATAAACTTTTGGATTTTTTCAT 71459936
Query 160405 CCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATA 160464
| | || || | || || || | || || ||||| || ||||| || || |
Sbjct 71459935 TCTGTAGTACATACCCCACATACTCCCTACTGACCACGAAGTAGGCACTGCCAGAAAAAA 71459876
Query 160465 TCGGTAT---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTT 160521
||| | | || ||| |||| |||| | || ||||| | | | ||| |
Sbjct 71459875 GAGGTGTTTCGAGTGGAGGAAGCGT---TTTGACAGTCCCTGTGTTTGTTAGCTTTCCAT 71459819
Query 160522 TCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCT 160581
| || | | | | |||||||||||||| | || || | |||||| | ||||| |
Sbjct 71459818 TAACGACCTCATACCGCTTCTTCCACCTTTCTTCTTTATGGGATGGCATCCTCTCCGTTT 71459759
Query 160582 CTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGA 160641
| || |||| | || | | | || |||| | |||| || |||||||| || || |
Sbjct 71459758 CCAGGTTGTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 71459699
Query 160642 GCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCA 160701
||||| || |||| || | ||||||| ||||||||| || || |||| | | |
Sbjct 71459698 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGA 71459639
Query 160702 GGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCT 160761
||||| ||||||| || | || ||||| || |||||||| || || || || || |||
Sbjct 71459638 GGTCCTTCATGCAGTTGAGGTCAGCCTGAACCCGGCTCCACGATGCATAAACCACACTCT 71459579
Query 160762 CTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG-- 160819
| | | |||||||||||||| ||| ||||| || |||| |||| ||| | |||
Sbjct 71459578 CCAATCGGCTGGCCACAAAGACATTACTAAAACAGGAAGCGATGCCCATCACTG-CAGCT 71459520
Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879
||| | | | || | ||| |||||| || | |||||| | ||||||||| ||
Sbjct 71459519 AAATAGGA-ATCCTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATA 71459461
Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939
||||||||| |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||
Sbjct 71459460 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 71459401
Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999
||| |||||||| | ||| || ||| |||| | | || || || |||||||
Sbjct 71459400 TATTGGAAACTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGAT 71459341
Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032
||| || ||| || | |||||||| |||||
Sbjct 71459340 GAAAGAAGAACAGTCACTGGTCATGTTTATATA 71459308
>seq10472
Length=202140232
Score = 176 bits (194), Expect = 5e-39
Identities = 234/324 (72%), Gaps = 2/324 (1%)
Strand=Plus/Plus
Query 168151 ATAGA--GTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCA 168208
||||| || | ||| | | |||| || ||||| || | || || || |||||||| ||
Sbjct 20503406 ATAGACGGTGAGGCAGGCTGTTCCTGAGATCTTCCCAAAACCAAAGGTATTGAAGAGACA 20503465
Query 168209 CATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAG 168268
|||| | || ||||| ||||||| |||| ||||||| || || | ||||||||| ||||
Sbjct 20503466 CATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGAG 20503525
Query 168269 GCCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTT 168328
|||| ||| || ||||| | |||||||| | ||| || | || || || |||||
Sbjct 20503526 TCCCAGCTGGGTAATGTTTATCTTGTCTTTATAGGCAGGCTGGATCACCACCCCATGGTT 20503585
Query 168329 CTCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTAT 168388
||||||||||||| ||||||| || ||||| || || | |||||||| ||||| ||
Sbjct 20503586 CTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTTACAAT 20503645
Query 168389 CAGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTC 168448
|| | || | | | ||||| || ||| | | ||||| || |||| |||| | ||
Sbjct 20503646 GAGGGCTTCCTGTGCATTTTGCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTGCTC 20503705
Query 168449 TCGCTCATCTTGAGTTACGACCTG 168472
|| ||||| || || || || ||
Sbjct 20503706 TCTTTCATCCTGGGTCACCACTTG 20503729
Score = 84.2 bits (92), Expect = 3e-11
Identities = 151/220 (69%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 167883 GTTTGCCGTATGTCCGTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTT 167942
|||||| | ||| || ||||| |||| || || |||| ||| |||||||| ||
Sbjct 20500874 GTTTGCTTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTC 20500930
Query 167943 CCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTG 168002
|| || ||| |||| || ||||| | || | ||||| || ||| || || |||||
Sbjct 20500931 CCCACCTGATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTT 20500990
Query 168003 CGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATT 168062
| || | | || || || || ||||||||||| | | ||||||||||| |
Sbjct 20500991 GGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAAGACC 20501050
Query 168063 ACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTA 168102
| || || || || || || |||||||| || |||||||
Sbjct 20501051 ATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATATTTA 20501090
>seq18647
Length=51634
Score = 116 bits (128), Expect = 4e-21
Identities = 582/913 (64%), Gaps = 23/913 (3%)
Strand=Plus/Plus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
|||| |||||| || | || |||| ||| ||| || | ||||| ||| ||| | |||
Sbjct 39885 TGTCTCAGATGATCATTCAAACATCGGATGGCAAAGAGGTCAATGTCGATGTCAAGCTTA 39944
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || |||| ||||| || | || ||||| | || ||| || | | ||| | |
Sbjct 39945 TTGGCAAACAAGTGGTGC---TTGCGCAGCATCCATTTCAAGTCACCAGCTCTGAAAATG 40001
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
|| || | | | ||| | || | || || ||||| |||| || || | || |||
Sbjct 40002 CACACCAAGTGCACGTGGTCCCCATGGCGGGGTGGGTAGGGAGCACCCTTGGAAACATCA 40061
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
|| || ||| ||||||||| ||||| ||||| | || || |||| | ||| ||
Sbjct 40062 CCCTCCAAGTGCTGCCACTTGACAAATCTGGCAACTGCATGTGTGTCAGGCAAGTCATAC 40121
Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346
|| | | || | | | ||| || | || |||| ||| | |||||| || ||
Sbjct 40122 TTATGGCTTGTGGAGAGTGAGCTGGGGACTTCAGGAATACTCTGGATGGTGGCTCAGAGA 40181
Query 160347 TGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCT-GTC 160405
|| || ||||||||||| ||||| | | ||| ||||| |||| | |||| | ||
Sbjct 40182 TGCTCATCGGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGATTTTTTTAATC 40241
Query 160406 CCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465
| | || || | || || || | || ||||| || | | || || | |
Sbjct 40242 CTGAAGTACATACCCTACATACTCCCTACTGACCACAAAATAGACACACCCTGAACAAAG 40301
Query 160466 CGGTAT---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTT 160522
|| | || ||| ||| | ||| | | || ||||| | || | |||
Sbjct 40302 AAGTGTCTCAAGTGGAGGAGGCAT---TTTAACATTCCCTGTGTTTGTCAGCTTTCC--- 40355
Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGAC-CATCTTGTGCGGTGGCATGCGTTCCGTCT 160581
| | | | | |||| |||||||| | | ||| || | |||||| | ||| | |
Sbjct 40356 AAAAACCTCATACTGCTTTTTCCACCTTTCTCCTCTATTG-GATGGCATCCTCTCCATTT 40414
Query 160582 CTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGA 160641
| || |||| | || | | | || | || | |||| || ||||||| | || |
Sbjct 40415 CGAGGTTGTTTTCTCCCATTAACAACTTGATCTTCCTGACAATTGCTAGGTTGGCTTTAA 40474
Query 160642 GCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCA 160701
||||| || |||| || | ||||||| ||| ||||| || |||| | | |
Sbjct 40475 TAGGAAAATCCATACCACAAAGTTTTATCAAGTATTTCCAGCCTGCACTCATTGCTTAGA 40534
Query 160702 GGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCT 160761
||| ||||||||| || | || |||| || ||||||| || || || || | |||
Sbjct 40535 GGT-CCTCATGCAGTTGAGGTCATCCTGAACCTGGCTCCATGATGCATAAACCATACTCT 40593
Query 160762 CTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGAT-TCC--CACCACCGCCA 160818
| | | |||||||||||||| ||| ||||| | | || ||| ||| | || |
Sbjct 40594 CCAATCAGCTGGCCACAAAGACTTTACTAAAACAGAATGCAATGTCCATCACTGCAGCTA 40653
Query 160819 GAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGT 160878
|||| | ||| || | ||| ||| | ||| | | ||| | ||||||||| |
Sbjct 40654 AAAAGGA-ATC--CTCTGATTTTTTGTCTATGTGAATGTGATAGAAATTCTGAGGCATAT 40710
Query 160879 AGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGG 160938
|||| ||||| || | ||| || | ||| || ||||| ||||| | ||| ||||| || |
Sbjct 40711 AGAT-GCCCTCAGTATCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATG 40769
Query 160939 CTATCGGAAACTC 160951
|| | |||||||
Sbjct 40770 CTGTTTGAAACTC 40782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576775210206600
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