Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13964 125 8e-24 >seq13964 Length=198332218 Score = 125 bits (138), Expect = 8e-24 Identities = 183/257 (71%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||| | |||||||| || || || || || | ||||||||| || ||||| || Sbjct 63407432 AAATGGGGCAAGATGTTTCTTCACTCCGATGGGCCCCATGCCAGGACCACCTCCTCCGTG 63407491 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 |||| ||||| ||||| || | |||||| || | ||||| | ||| |||| | || Sbjct 63407492 GGGAAAGCAGAAGGTCTTGTGAAGATTTAGGTGCGAGACATCAGACCCAAAGTCTCCAGG 63407551 Query 138281 TTTTGCTAGA--CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCA 138338 | | ||| || ||||| || || | |||||| ||||| || || ||||| || ||| Sbjct 63407552 GT--GACAGATTCCCACCTGAGCGTTCATATTTGCCCCATCTAGGTAGACCTGTCCTCCA 63407609 Query 138339 TTGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGAT 138398 | | ||| | || | ||| || | |||||||| |||||| || |||| || ||| Sbjct 63407610 TGTTGATGGATGAGGTCACACATGTCACTGATGTTCTCTTCAAACACCCCATTGGTGGAT 63407669 Query 138399 GGATATGTAATCATAAT 138415 || ||||||||||| || Sbjct 63407670 GGGTATGTAATCATGAT 63407686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578553041668200