Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq42212 141 2e-28
seq25851 123 5e-23
seq1 120 6e-22
seq45237 118 2e-21
seq51122 111 3e-19
seq20726 109 1e-18
seq49093 105 1e-17
seq23159 102 2e-16
seq37270 100 6e-16
seq9309 91.5 3e-13
seq17816 86.0 1e-11
seq47930 84.2 4e-11
>seq42212
Length=99152023
Score = 141 bits (156), Expect = 2e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| ||||| | || || | ||| | ||||| ||| ||| || ||||| || ||||
Sbjct 87790062 ACCACCACTAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 87790120
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| || | || || ||||||||||| | |||||| |||||||| |
Sbjct 87790121 ACAAAGTACGTCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 87790180
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | ||| |
Sbjct 87790181 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 87790240
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| || || |||||||||||
Sbjct 87790241 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCATTTT 87790292
>seq25851
Length=153482349
Score = 123 bits (136), Expect = 5e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || ||||
Sbjct 83238645 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 83238587
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| || || ||||||||||| | |||||| |||| ||| |
Sbjct 83238586 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATGAGGAG 83238527
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| ||| || | ||| |
Sbjct 83238526 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAA 83238467
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| | || || ||||| || || | | ||||| || || |||||||||||
Sbjct 83238466 CCTTGAGGGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTT 83238415
>seq1
Length=229942017
Score = 120 bits (132), Expect = 6e-22
Identities = 153/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391
||| | ||||| ||| ||| || ||||| || ||||| || || ||| |||| |||| |
Sbjct 142062302 ATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGCT 142062360
Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451
| || ||||||||||| | |||| | |||||||| | |||||||| ||||| || || |
Sbjct 142062361 GCTTGCCAGCAAAGATCAGTCTCCGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATCT 142062420
Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511
| |||||||| ||| | ||| || | ||| || || || || ||||| || || |
Sbjct 142062421 TGGCCTTTACATTTTCTATCGTATCCGAGGGTTCGACCTCGAGGGTGATGGTCTTCCCCG 142062480
Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539
| | ||||| | || |||||||||||
Sbjct 142062481 TAAGGGTTTTCACGAAAATCTGCATTTT 142062508
Score = 120 bits (132), Expect = 6e-22
Identities = 153/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391
||| | ||||| ||| ||| || ||||| || ||||| || || ||| |||| |||| |
Sbjct 142066373 ATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGCT 142066431
Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451
| || ||||||||||| | |||||| |||||||| | |||||||| ||||| || || |
Sbjct 142066432 GCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATCT 142066491
Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511
| |||||||| ||| | ||| || | || || || || || ||||| || || |
Sbjct 142066492 TGGCCTTTACATTTTCTATCGTATCCGAGGGTTTGACCTCGAGGGTGATGGTCTTCCCCG 142066551
Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539
| | ||||| | || |||||||||||
Sbjct 142066552 TAAGGGTTTTCACGAAAATCTGCATTTT 142066579
>seq45237
Length=73212453
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384
|| || ||||| | ||||| |||||| ||||| || |||| || || | | ||||
Sbjct 10340761 AACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGACAAAGTACATCCATCT 10340702
Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444
|||| ||| || ||||||||||| ||| || |||||||| || ||||||| |||||
Sbjct 10340701 TCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTTCTTATCC 10340642
Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504
|| || || |||||||| ||| |||||| | ||| || || || || |||||
Sbjct 10340641 TGGATCTTGGCCTTTACATTTTCTATCATATCTGAAGGTTCAACCTCGAGGGTGATGGTC 10340582
Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || | ||||| | || |||||||||||
Sbjct 10340581 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10340547
>seq51122
Length=156195299
Score = 111 bits (122), Expect = 3e-19
Identities = 151/208 (73%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391
||| | ||||| ||| ||| || || || | ||||| || || ||| |||| |||| ||
Sbjct 3370917 ATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTT 3370859
Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451
| || ||||||||||| | ||| || |||||||| | |||||||| ||||| || || |
Sbjct 3370858 GCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATCT 3370799
Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511
| |||||||| ||| | |||||| | ||| | || || || ||||| || ||
Sbjct 3370798 TGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAGCCTCAAGGGTGATGGTCTTCCCCC 3370739
Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539
||| ||||| | || ||||||| |||
Sbjct 3370738 TTAGGGTTTTCACGAAAATCTGCAGTTT 3370711
>seq20726
Length=174210431
Score = 109 bits (120), Expect = 1e-18
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| || || ||||| | ||||| ||| ||| || ||| | || ||||
Sbjct 115806507 ACCACCACGAAGTTTCAACACAAAATGAAGAGTAGACTCCTTTTGA-ATACTGTAGTCAG 115806449
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| |
Sbjct 115806448 ACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 115806389
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| ||| | | |||
Sbjct 115806388 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCAAGGTTTCAG 115806329
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| | || || ||||| || | || || |||| | ||| |||||||||||
Sbjct 115806328 CCTTGAGGGTGATGGTCTTCTCTGTAAAACTTTTCACAAAAATCTGCATTTT 115806277
>seq49093
Length=62736349
Score = 105 bits (116), Expect = 1e-17
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 192311 CACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGAT 192369
|||| | ||| | ||||| | ||| | ||||| ||| ||| || || || || |||||
Sbjct 12518323 CACCACGAAGTCTCAATACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGAC 12518265
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| | | | |||| |||| ||| || | ||||||||| | ||| | |||||||| ||
Sbjct 12518264 AAAGGACATCCATCCTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTACTGATCAGGAGGA 12518205
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| ||||| || | || |||| ||| | | | ||| || | ||| ||
Sbjct 12518204 ATTCCTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTGTCGTATCCGAGGGTTCAACC 12518145
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 12518144 TCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTT 12518095
Score = 102 bits (112), Expect = 2e-16
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||| ||| || ||||||||||||| ||| || |||||||| || |||||||| |
Sbjct 34352583 CATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 34352524
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
|||| || || || | || ||||| | | ||| || | ||| || || || || |
Sbjct 34352523 TATCCTGGATCTTGGTCTTCACATTTTCTGTCATATCCGAGGGTTCAACCTCGAGGGTGA 34352464
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
||||||| || || | ||||| | || ||||||||||
Sbjct 34352463 TGGTTTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 34352425
>seq23159
Length=157549271
Score = 102 bits (112), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||| ||| ||| || || || || ||||
Sbjct 155362260 ACCACCACGAAGTCTCAACACAAGATGAAGGGTAAGCTCCTTTTGA-ATGTTGTAGTCAG 155362202
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| | || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| |
Sbjct 155362201 ACA--GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 155362144
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| ||||| || ||||| || || || |||||||| ||| | ||| | | ||| |
Sbjct 155362143 GAATTCCCTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAA 155362084
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| | || | ||||| || || || || ||||| || || |||||||||||
Sbjct 155362083 CCTTGAGGATGATGGTCTTCCCTGTAAAGGTTTTTATGAAAATCTGCATTTT 155362032
>seq37270
Length=136387465
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | || | || | ||| | |||||| ||| || || |||
Sbjct 127297580 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCA 127297639
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| ||||| ||||||||||| || ||||| || |||||
Sbjct 127297640 GACAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGA 127297699
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || |||| || | ||
Sbjct 127297700 GGAATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTCTCAATAGTGTCACTAGGCTCC 127297759
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| ||||| |||||||| | || || | || ||||||||
Sbjct 127297760 ACCTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 127297809
>seq9309
Length=24659
Score = 91.5 bits (100), Expect = 3e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||| ||| || ||||||||||| | ||| || | | |||| | ||||||| |
Sbjct 22119 CATCTTCCAGTTGCTTGCCAGCAAAGATAAGTCTTTGCTAACCAGGAAGATTTCCTTCCT 22060
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
|||| || || || |||||||| ||| | |||||| | ||| || || || || |
Sbjct 22059 TATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAAGGTTCAACCTCCAGGGTGA 22000
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|||| || | | | ||||| ||||| |||||||||||
Sbjct 21999 TGGTCTTCTCTCTAAGAGTTTTTATAAAAATCTGCATTTT 21960
>seq17816
Length=183952662
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || || ||||| || | | | | || |||| ||| || ||||||||||
Sbjct 139841453 CTTTTGA-ATGTTGTAGTCAGACAAAGCACATCCGTCTTCCAGTTGCTTGCCAGCAAAGA 139841511
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| | ||| | || ||||| || |||||||| ||||| || || || |||||||||
Sbjct 139841512 TCAGTCTTTACTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGGTTTTACATT-- 139841569
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
| | | ||| | | ||| || || ||||| |||| ||| | | || ||| | || |
Sbjct 139841570 TCCTTGTATC-CAAGGTTCAACCTCAAGAGTGATGGCTTTCTCCATAAAGGTTGTTATGA 139841628
Query 192527 ATATCTGCATTTT 192539
| |||||||||||
Sbjct 139841629 AAATCTGCATTTT 139841641
>seq47930
Length=60714840
Score = 84.2 bits (92), Expect = 4e-11
Identities = 160/232 (69%), Gaps = 3/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | || | ||||| | ||| | || || ||| ||| || || || || ||||
Sbjct 7830276 ACCACCACGAATTCTCAATACAAGATGAAGAGGAGACTCCTTTTGA-ATGTTGTAGTCAG 7830218
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| | || ||| |||| |||| | | || ||||||||||| | ||| || |||||||| |
Sbjct 7830217 ACAGAGTACGTCCATCTTCCAGT-GCTTGCCAGCAAAGATAAGTCTTTGCTGATCAGGAG 7830159
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||| ||||||| | || || || |||||||| || ||| | | |||
Sbjct 7830158 GAATTCTTTCTTTACCCTGGATCTTGGCCTTTACATTTTCTACCATATCCAAGGGTTCAG 7830099
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | |||| | || |||| ||||||
Sbjct 7830098 CCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTGCAGGAAAATCTACATTTT 7830047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983703819047250
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