Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq37270 102 8e-17
seq36523 100 3e-16
seq42212 93.3 4e-14
seq45237 86.0 6e-12
seq45999 84.2 2e-11
>seq37270
Length=136387465
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || |||||| |||||| |||||||| |||| |
Sbjct 127297160 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCCAGCTGTTTCCCGGCA 127297219
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| ||||| || ||| || |
Sbjct 127297220 AAAATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 127297279
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| |||| || | || ||||||||||| || ||
Sbjct 127297280 TTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTC 127297339
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 127297340 ACGAAGATCTGCAT 127297353
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || ||| || |||||| |||||||| || | |
Sbjct 127297616 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCA 127297675
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| || || || ||| || |
Sbjct 127297676 AAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTGACG 127297735
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| || | |||||||| |||| || | || ||||||||||| || ||
Sbjct 127297736 TTCTCAATAGTGTCACTAGGCTCCACCTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTC 127297795
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 127297796 ACGAAGATCTGCAT 127297809
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||| || || ||| || |||||| ||||| || |||| |
Sbjct 127298528 GACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCA 127298587
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| ||||| || ||| || |
Sbjct 127298588 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 127298647
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| |||| || | || |||||||||||||| ||
Sbjct 127298648 TTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTC 127298707
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 127298708 ACGAAGATCTGCAT 127298721
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 131906 AAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGC 131965
||||||| ||||| || | | |||||||| || ||||||||||| || ||| ||
Sbjct 127296908 AAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGT 127296967
Query 131966 GAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCT 132025
|||||| |||||||| || | | |||| | | ||| || || ||||| ||||||||
Sbjct 127296968 CCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 127297027
Query 132026 TTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTC 132085
|| || || ||| || | | || | || || | |||||||| |||| ||
Sbjct 127297028 TTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTG 127297087
Query 132086 AGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | ||| ||||||||
Sbjct 127297088 ATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 127297125
>seq36523
Length=132107971
Score = 100 bits (110), Expect = 3e-16
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| ||| ||||| | |||||||||||||||||| ||| ||||| || ||||| |
Sbjct 66621923 TGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 66621982
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|||| |||||||| || | |||||| ||||||| |||||
Sbjct 66621983 TGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGG 66622022
>seq42212
Length=99152023
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||| |||||||| || ||||| |||||| ||||| || || | |
Sbjct 87790096 GACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCTAGCTGCTTGCCAGCA 87790155
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| ||||| || || || |
Sbjct 87790156 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 87790215
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 87790216 TTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTC 87790275
Query 132110 ATGAAAATCTGCAT 132123
||||||||||||||
Sbjct 87790276 ATGAAAATCTGCAT 87790289
>seq45237
Length=73212453
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | |||||||| || ||||||||||| | ||||| |
Sbjct 16727307 CGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCA 16727248
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | | |||| || | ||| || || || || |||||||| |||
Sbjct 16727247 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 16727188
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | ||| | || || | |||||||| || | || |
Sbjct 16727187 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 16727128
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| || ||||| | ||| ||||||||
Sbjct 16727127 GTCTTGCCAGTAAGGGTTTTCACGAAGATCTGCAT 16727093
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||| || | | ||||||| || || ||||||||||| | || || ||||||
Sbjct 16727529 ACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCC 16727470
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || || | | |||| || | ||| || || ||||| ||||||||||||||
Sbjct 16727469 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGAATGCCTTCTTTATCCTGG 16727410
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || |||| | ||| | || || | |||||||| || | || | || ||
Sbjct 16727409 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 16727350
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| ||||| || || | ||| ||||||||
Sbjct 16727349 CCGGTCAGGGTCTTCACGAAGATCTGCAT 16727321
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| || | | | |||||||| || ||||||||||| | || ||
Sbjct 16727767 CAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 16727708
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| ||||| || || | | |||| || | ||| || || || || ||||||||
Sbjct 16727707 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTC 16727648
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || |||| | ||| | || || | |||||||| || | ||
Sbjct 16727647 TTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGT 16727588
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | ||| ||||||||
Sbjct 16727587 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 16727549
>seq45999
Length=10578
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| || | | | |||||||| || ||||||||||| | || ||
Sbjct 9268 CAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 9209
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| ||||| || || | | |||| || | ||| ||||| || || ||||||||
Sbjct 9208 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGGGGGGGATGCCTTC 9149
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || ||||| | || | || || | |||||||| || | ||
Sbjct 9148 TTTATCCTGGATCTTGGCTTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGT 9089
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | || ||||||||
Sbjct 9088 AATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 9050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476244596622600
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