Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq23159 84.2 2e-11 >seq23159 Length=157549271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || ||||||| || || || || | |||| || | || ||| | Sbjct 155362031 CAAAATGCAGATTTTCATAAAAACCTTTACAGGGAAGACCATCATCCTCAAGGTTGAACC 155362090 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | ||||| || || ||||| ||||| || || || || Sbjct 155362091 CTTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAGGGAATTCCTCCTGA 155362150 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||||||||| || | | ||||| ||||| ||||||| | | |||| || || Sbjct 155362151 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTGTC--TGACTA 155362208 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||| |||||||| || ||| ||||| | ||||| ||| Sbjct 155362209 CAACATTCAAAAGGAGCTTACCCTTCATCTTGTGTTGAGA 155362248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444752038951200