Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq46691 168 6e-37
seq47930 109 5e-19
>seq46691
Length=94050890
Score = 168 bits (186), Expect = 6e-37
Identities = 134/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || ||||||||||||||||| ||||| || || |||||||| ||||| |||| |||
Sbjct 32059120 TGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCC 32059179
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||||||||||| || || ||||||||||||||||| | ||| | || ||||| |||
Sbjct 32059180 ATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGG 32059239
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| ||||| || || |||||||||||||| |||||
Sbjct 32059240 CAGAGGGCATGGCATGGAGGCAGCGCCATCAGAGGAAGATC 32059280
Score = 168 bits (186), Expect = 6e-37
Identities = 134/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| |||||||||||||| || || ||||| |||||||||| ||||| || | |||
Sbjct 32059280 GATCTTCCTCTGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAAC 32059221
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
| ||||||||||||||||| || || |||||||||||||||| |||| ||||| |||
Sbjct 32059220 AGTGAGCTGTCCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTC 32059161
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| ||||||||||||||||| || ||
Sbjct 32059160 AACATCGCCAGCTACGCCCTGCTCACGTACATGATTGCGCA 32059120
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || ||||||||||| || || || ||||||||||| || || ||
Sbjct 32063298 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCT 32063357
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | ||| ||| | |||||| ||||||||| || || | || |||||||| |||
Sbjct 32063358 CTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTC 32063417
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
|| ||| ||| || ||||| || | || ||||
Sbjct 32063418 ACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGG 32063451
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || | || ||||| || ||| ||| ||||| |||||||| || | || || |
Sbjct 32063451 CCACAAATGCTAAAGAGCTGTCTTCCAAGGGAGTGAAAATCTGGGATGCCAATGGATCCC 32063392
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412
|||||||| |||||| | ||| ||| | | | || || || ||||||||||| || |
Sbjct 32063391 GAGACTTTTTGGACAGCCTGGGATTCTCCACCAGAGAAGAAGGGGACTTGGGCCCAGTTT 32063332
Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
| || ||||||||||| || |||||||| || ||
Sbjct 32063331 ATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATA 32063298
>seq47930
Length=60714840
Score = 109 bits (120), Expect = 5e-19
Identities = 178/254 (70%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|||||||||| ||||| |||| || |||| || ||||| || || | |||
Sbjct 36491691 ATTTTGAGCTTTGGGAAAGGTCTTGGTTCTCTCTGAAGCTGAATTTTCAGTTTTGCAATG 36491750
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613
|| ||||||| | || | |||| ||||| ||||| | | || ||||| | ||
Sbjct 36491751 TGACTCAGGTAAACATACACATCTCCCAAAGTATGTGCGAAGTCACCAGGCTTTAGGTCC 36491810
Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG-GCACCCC 6672
|| || | ||||| || |||||||| ||||| || | |||||||| | ||||||
Sbjct 36491811 GTGATGTGTGTGATCACATAAGTGAGCAGGGCGTAGCTGGTGATGTTGAAGGTGCACCC- 36491869
Query 6673 TAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTA 6732
| ||| ||||||| || | || | ||||||||||||||||| || ||| | ||| |
Sbjct 36491870 -AGGCCCCTGTCTCCTGACCTCTGGTGCAGCTGGCAGGACAGCTCACCGTTCACCACGAA 36491928
Query 6733 GAATTGGCAGAGGG 6746
||| |||||| |||
Sbjct 36491929 GAACTGGCAGGGGG 36491942
Score = 109 bits (120), Expect = 5e-19
Identities = 178/254 (70%), Gaps = 3/254 (1%)
Strand=Plus/Minus
Query 34599 CCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGG 34658
||| |||||| |||| ||| | ||| || ||||||||||||||||| | || | || |
Sbjct 36491942 CCCCCTGCCAGTTCTTCGTGGTGAACGGTGAGCTGTCCTGCCAGCTGCACCAGAGGTCAG 36491883
Query 34659 GAGACATGGGGTTAGGGGTGC-CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717
|||||| ||| | |||||| | |||||||| | || ||||| |||||||| || ||
Sbjct 36491882 GAGACAGGGGCCT--GGGTGCACCTTCAACATCACCAGCTACGCCCTGCTCACTTATGTG 36491825
Query 34718 ATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCAT 34777
||| | || || || | ||||| || | | ||||| ||||| |||| | ||
Sbjct 36491824 ATCACACACATCACGGACCTAAAGCCTGGTGACTTCGCACATACTTTGGGAGATGTGTAT 36491765
Query 34778 ATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTC 34837
| ||||||| ||||| | || || ||||| || |||| || |||| |||
Sbjct 36491764 GTTTACCTGAGTCACATTGCAAAACTGAAAATTCAGCTTCAGAGAGAACCAAGACCTTTC 36491705
Query 34838 CCCCAGCTCAAAAT 34851
|| ||||||||||
Sbjct 36491704 CCAAAGCTCAAAAT 36491691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447917602165200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |