Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq20429 152 5e-32 seq1558 138 1e-27 seq1 136 4e-27 seq15374 127 2e-24 seq2225 123 3e-23 seq20873 116 4e-21 seq16418 114 1e-20 seq16984 96.9 4e-15 seq2224 87.8 2e-12 seq16296 84.2 2e-11 seq19918 82.4 8e-11 >seq20429 Length=9870158 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || |||||||| ||||||||| |||| ||||| ||| Sbjct 2401157 AATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 2401216 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||||| ||| || | ||||| ||||||||||| | || || Sbjct 2401217 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCA 2401276 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || |||||||| || | ||||||||| |||||||| Sbjct 2401277 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2401336 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| ||||| || ||| | || | || || ||| Sbjct 2401337 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGAGGTGGC 2401385 >seq1558 Length=6673444 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || || || || || ||||| ||||||||| | || || || || Sbjct 2790474 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 2790533 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | | ||| | | | | | |||| || || | || || || ||||||||| | || Sbjct 2790534 AGCAACACCATCAAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGAT 2790593 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| || |||| |||||||| || | |||||| || |||||| Sbjct 2790594 CAGCAGCGGCTCATCTTTGCATGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTAC 2790653 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| | || ||||| || || | ||||||||||| ||| Sbjct 2790654 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGGC 2790704 >seq1 Length=29265399 Score = 136 bits (150), Expect = 4e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || || || || || ||||| ||||||||| | || || || || Sbjct 23782928 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 23782987 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | | || | || || | || || || || |||||| | ||| Sbjct 23782988 AGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCC-CTGAC 23783046 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| || ||||| ||| |||| || | |||||| || |||||| Sbjct 23783047 CAGCAGCGGCTCATCTTTGCAGGCAAGCAGGTGGAAGATGGGCGCACTCTTTCTGACTAC 23783106 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||| | || |||||||| || ||||| ||||||| || Sbjct 23783107 AACATCCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGCCTGAGGGGTGG 23783156 >seq15374 Length=4994092 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || || || || || ||||| ||||||||| | || || || || Sbjct 172681 AAAATGCAAATTTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 172740 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | | || | || || | || || || || |||||| | ||| Sbjct 172741 AGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCCCCTGAC 172800 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| || ||||| |||||||| || | |||||| || |||||| Sbjct 172801 CAGCAGCGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTAC 172860 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| ||| | || ||||| || || |||| Sbjct 172861 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCG 172898 >seq2225 Length=8022615 Score = 123 bits (136), Expect = 3e-23 Identities = 306/460 (67%), Gaps = 12/460 (3%) Strand=Plus/Minus Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || ||||| || || || || || ||||||| || || || || ||| ||||||||| Sbjct 9956 GTTCTGGCTTTCTTTGCAGCAAGTGACGGCAGAGTAAATGACAACTGGGTGGAGCGTTTC 9897 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 || || || ||| | | || || | || ||||| ||||| || || |||| | | Sbjct 9896 AGCCAAGAAGTTCAGATTACAGAAGCCCACTGTTTCTATGGCTTCCAAATTGCCACGTAA 9837 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAG 116935 ||| | | || || |||||| | || || ||||| | | || | | | | Sbjct 9836 AACATACCTTCTGAGATGTATA-GTTGCTTATGGACACATTAAAGATTTCAAAGAAAGGG 9778 Query 116936 AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGG 116995 || || | || | |||||| || | | |||| ||||| || ||||||| || ||| Sbjct 9777 AATTTC----TCTTCAGCGCCATTGAAATGCTGCCTTGCGTGAAGAAGAAGGCAGATTGG 9722 Query 116996 GCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG--GCCTTCG 117053 || |||| |||| | | || |||||| |||| | | | | || || ||||| | Sbjct 9721 GCCTTGCGTTGGACTGGGGACAAAGAGGCTGCCTAC--CAA---CATGTTGCAGCCTTTG 9667 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| |||||||||| | || || | || || |||||||||||| Sbjct 9666 CCGCAGTGGAAGGCATCTTCTTTTCCTGTTCATTTGCATCAATGTTCTGGCTCAAGAAAT 9607 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 | || || |||||| ||| || || | | || || || ||| || |||||| | | Sbjct 9606 GGGGACTGATGCCCCACCTCACATTTTACTATGAACTTATTAGCAGAGATGAGGGTTTAC 9547 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA 117213 | || ||||||||||| || ||| ||| ||| |||| || Sbjct 9546 ACTGTGACTTTGCCTGCCTGATGTCCAAACATCTGGTACA 9507 >seq20873 Length=9479699 Score = 116 bits (128), Expect = 4e-21 Identities = 165/230 (72%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || || || || || ||||| ||||||||| | || || || || Sbjct 8324529 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 8324470 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAA--AAAATTCTCGACAAAGAGGGCATCCCCGCG- 40803 | || | | | | | | |||| || |||| || ||||| ||||||||| | Sbjct 8324469 AGTGATACCATTGAGAATGTGAAGGGGCCAAGATTCAGGATAAAGAAGGCATCCCCCCCT 8324410 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| | ||||||| || ||||| |||||||| || | |||||| || ||| Sbjct 8324409 GACCAGCAGTGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGAC 8324350 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGG 40913 |||| |||||| || ||| || ||||| || || | ||||||||||| Sbjct 8324349 TACAGCATCCACAAAGAGTAGACCCTGCACCTGGTCCTCCGCTTGAGGGG 8324300 >seq16418 Length=1794168 Score = 114 bits (126), Expect = 1e-20 Identities = 151/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| ||||||||| | || |||||| ||| Sbjct 1337913 ATGCAGATTTT-GTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAACCCAGT 1337971 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| | ||||| | ||||| |||||||||||| | ||||| Sbjct 1337972 GACACCATCGAGAACG-TCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCC-CCGACCA 1338029 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | || ||||||| |||||| || | | ||| || ||||||||| Sbjct 1338030 GCCGCGTCTGATATTTGCAGGCAAACGGCTGGAGGATGGCCACACTCTTTCCGACTACAA 1338089 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| | ||| ||| |||| |||| Sbjct 1338090 CATTCGGAAAGAGTCCACCGTGCA 1338113 >seq16984 Length=22061292 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/197 (73%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 40704 AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG-TGCAAA 40762 ||| || |||| ||||| ||||||||| | || ||| | ||| ||||| | || || Sbjct 20906579 AAACACCCTCATCGGCAAGACCATCACCCTTGAGGTCAAGCCCAGCGACACCACTGAGAA 20906638 Query 40763 CGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCT 40822 | |||||| ||| || | |||| |||||||||||| || | ||||| | |||| Sbjct 20906639 TG-TCAAGGCAAAGATCCAA-ACAAGGAGGGCATCCCCCCG-ATCAGCAGAAGTTGATCT 20906695 Query 40823 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGG 40882 | || || |||||||| || | ||||||||| | ||||||||||||| ||||| Sbjct 20906696 TTGTCGGGAAGCAGCTGGAAGATGGGCGCACCCTGACTGACTACAACATCC---AGGAGT 20906752 Query 40883 CCACGCTGCATCTAGTG 40899 |||| ||||| || ||| Sbjct 20906753 CCACCCTGCACCTGGTG 20906769 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/197 (73%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 40704 AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG-TGCAAA 40762 ||| || |||| ||||| ||||||||| | || ||| | ||| ||||| | || || Sbjct 20913882 AAACACCCTCATCGGCAAGACCATCACCCTTGAGGTCAAGCCCAGCGACACCACTGAGAA 20913941 Query 40763 CGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCT 40822 | |||||| ||| || | |||| |||||||||||| || | ||||| | |||| Sbjct 20913942 TG-TCAAGGCAAAGATCCAA-ACAAGGAGGGCATCCCCCCG-ATCAGCAGAAGTTGATCT 20913998 Query 40823 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGG 40882 | || || |||||||| || | ||||||||| | ||||||||||||| ||||| Sbjct 20913999 TTGTCGGGAAGCAGCTGGAAGATGGGCGCACCCTGACTGACTACAACATCC---AGGAGT 20914055 Query 40883 CCACGCTGCATCTAGTG 40899 |||| ||||| || ||| Sbjct 20914056 CCACCCTGCACCTGGTG 20914072 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/213 (69%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG-TGCA 40760 || || || || || ||||| ||||||||| |||| || || ||| ||||| | || Sbjct 20914103 GTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGCGACACCACTGAG 20914162 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 || | |||||| ||| || | ||||| || |||| |||| | ||||| | | || Sbjct 20914163 AATG-TCAAGGCAAAGATCCAAGACAAGGAAGGCACCCCCCCCCGTCAGCAGAGGTTGAT 20914221 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || || || ||| ||||||| || | |||||||| | |||||||||| | Sbjct 20914222 CTTTGCTGGGAAATAGCTGGAAGATGGACGCACCCTGTCC-------ACATCCAGAAACA 20914274 Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGG 40913 | |||| ||||| | | ||||||||||||| Sbjct 20914275 GTCCACCCTGCACTTGCTCCTGCGCTTGAGGGG 20914307 >seq2224 Length=17281721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||| | |||||| || | || || || ||| Sbjct 758092 ATGCAGATTTTCGTCAAGACCCTGACTGGCGAGACCATCGCCCTGGAGGTGGAGCCCAGT 758033 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | || || || || | ||| | |||||| Sbjct 758032 GACACCATTGAGAATGAGAAGGCCAAGATCCAGGATAAGGAAGGGACCCCTCCTGACCAG 757973 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || || || ||||||| || | || | | || ||||||||| Sbjct 757972 CAGCGGCTCATCTTTGCAGGTAAGTAGCTGGAAGATGGGCACGCTCTTTCTGACTACAAC 757913 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| || ||| | || ||||| || || | |||||||||| ||| Sbjct 757912 ATCCAAAAAGAGTCAACCCTGCACCTGGTCCTCTGCTTGAGGGGTGGC 757865 >seq16296 Length=2251693 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 |||||||| | |||||||| || || || | | ||||||||||||||| || | ||| Sbjct 936432 GGCATCCCACCTGACCAGCAGCGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCGC 936373 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 ||||| || |||||||| ||||| ||| |||| ||||| || ||| | || || | Sbjct 936372 ACCCTTTCGGATTACAACATTCAGAAAGAGTCCACCCTGCACCTGGTGCTTCGTCTGCGA 936313 Query 40912 GGCGGC 40917 || ||| Sbjct 936312 GGTGGC 936307 >seq19918 Length=441265 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || || |||||| | || ||||||||||| || || || || || || |||||| || Sbjct 65071 GAACCACTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTTCCTATTGAATACCATGAT 65012 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| ||||| || || || ||||| || |||||||| | ||||||||| Sbjct 65011 ATTTGGCAAATGTATAAGAAAGCTGAGGCTTCCTTCTGGACGGCCGAGGAGGT 64959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515074043430640