Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq17762 1660 0.0 seq15196 132 3e-26 seq4558 84.2 2e-11 >seq17762 Length=9376456 Score = 1660 bits (1840), Expect = 0.0 Identities = 1354/1643 (82%), Gaps = 29/1643 (2%) Strand=Plus/Plus Query 107136 AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCA 107195 ||| || |||||| ||| |||||||||||||||| | || ||| || ||| ||| ||| Sbjct 8213552 AGGCTCCTAGGCACATCTTTACTGAGGATATTTGTCCAGAGGAGAAATATATTTTTGCCA 8213611 Query 107196 TCACTCTGGAGTTGAACTTGATGTTC-TGG-----ATTAGTTTGTAATTAAAGGCATTTT 107249 ||| | |||||||||||||||||||| ||| ||||||| ||||| | ||||||||| Sbjct 8213612 TCAGTTTGGAGTTGAACTTGATGTTCCTGGGAACGATTAGTTGGTAATCAGAGGCATTTT 8213671 Query 107250 GTTCTGTCCAAGGATCTCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCAT 107309 ||||||| ||||||| | |||| |||| ||||||||||| |||| | | |||| || Sbjct 8213672 GTTCTGTTCAAGGATTCTTTGCTCCTCCTTCCCTGTGCCCAATCTCTACCGGCCTCCTAT 8213731 Query 107310 CCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTG 107369 | ||| ||||| | ||||| || || ||||||||| ||| | |||||||||||| Sbjct 8213732 TCTGTGACGATGGTTCAGTGGAGGA-GA--CTTTGCCGGCAGCATTACCTGTGGGCCCTG 8213788 Query 107370 GGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGAT 107429 |||||||||| |||||||||| ||||| |||||| |||||| ||||| || |||||||| Sbjct 8213789 GGCTGCTATACGCTGCTGGCCATTGTTGCTCTGAAACTTTCTCTCAGATTAAAATGTGAC 8213848 Query 107430 GTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTG 107489 || | |||| |||||||||||||| || || || |||||||||||||| || ||| Sbjct 8213849 TCCGACCACCTGGACCTGGAGTCCAGGGAATTTCAAAGCCAGCACTGTAGGGATATCTTG 8213908 Query 107490 TACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGG 107549 ||||| |||||| |||||||||| ||||| ||||||||||| |||||||| |||||| Sbjct 8213909 TACAAGTCCCTGAAACTGCCAGCAAGGAGATATATCAACTGTTCCGGGATCACCCGAGGG 8213968 Query 107550 GACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCG 107609 ||||||||||||||| | ||||| || || |||||||| || ||||| |||||| Sbjct 8213969 GACCAGGAAGCAGTGCTTCAGGCTCTTCTGAGTAACCTGGAGGTCAAGAAGAAGCGGGAA 8214028 Query 107610 CCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAA 107669 ||| |||| | | | |||||| | ||| |||||||||||||||| |||||| || Sbjct 8214029 CCTTTCACAGATGCAGACTACCTCCGGGTGACCGGAGACTGTGAGCGCTTTAAGGCCAAA 8214088 Query 107670 AGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCG 107729 |||||||||||||||||||||||||| ||||||||| | |||||||| ||||| ||||| Sbjct 8214089 AGGAAGTTCATACAGTTCCCACTGAGCAAAGAAGAGTTGGACTTCCCTATTGCATACTCT 8214148 Query 107730 ATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCT 107789 |||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 8214149 ATGGTGGTTCACGAGAAGATTGAAAACTTTGAAAGGCTGCTGCGAGCTGTGTATGCCCCT 8214208 Query 107790 CAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTC 107849 |||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||| ||| Sbjct 8214209 CAGAACATATACTGCGTCCATGTGGATGAGAAGTCCCCAGACACTTTCAAAGAGGCAGTC 8214268 Query 107850 AAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTT 107909 | ||| |||| ||| |||||||| ||||||||||| |||||||| |||||||||||||| Sbjct 8214269 AGGGCGATTACTTCATGCTTCCCAAATGTCTTCATTGCCAGTAAACTGGTCCCGGTGGTT 8214328 Query 107910 TATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGC 107969 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||||||| Sbjct 8214329 TATGCCTCCTGGTCCCGGGTGCAGGCTGACCTGAACTGCATGGAGGACTTGCTCCAGAGC 8214388 Query 107970 TCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAAT 108029 |||||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||| Sbjct 8214389 TCAGTGCCATGGAAATACTTCCTGAATACATGTGGGACAGACTTTCCTATAAAGACCAAT 8214448 Query 108030 GCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA 108089 || || ||||||| |||||||||||||||||| || | |||||||||||| || ||| | Sbjct 8214449 GCTGAAATGGTCCAGGCCCTCAAGATGTTGAATGGGAGGAACAGTATGGAATCAGAGATC 8214508 Query 108090 CCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTAC 108149 ||| |||||| ||||| | ||||||||||| | ||||||||||| ||||||| ||||| Sbjct 8214509 CCTACTGAGTACAAAAGACTGCGCTGGAAATATCACTATGAGGTGAAAGACACATTGTAC 8214568 Query 108150 CCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCC 108209 |||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||| Sbjct 8214569 ATAACCAGCAAGAAGAAGGACCCTCCCCCTAATAATTTAACCATGTTCACGGGGAATGCC 8214628 Query 108210 TATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGA 108269 ||| | ||||| || || | ||||||||||||||||||| | ||||| ||||||||| | Sbjct 8214629 TATATGGTGGCTTCCCGGGACTTTGTCCAACATGTCTTAAAGAACCCCAAATCCCAACAA 8214688 Query 108270 CTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAG 108329 ||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 8214689 CTGATTGAATGGGTAAAAGACACCTACAGCCCCGATGAACACCTCTGGGCCACCCTTCAG 8214748 Query 108330 CGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATG 108389 ||||| | |||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct 8214749 CGTGCACGATGGATGCCTGGCTCTGTTCCCTACCACGCCAAGTATGACATCTCAGACATG 8214808 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449 ||| |||| |||||||| || || ||| | | |||||||| |||| | |||||| Sbjct 8214809 ACTTCCATTGCCAGGCTAGTTAAATGGGCGGTGTATGAGGGAGACGTCAATAAGGGGGCA 8214868 Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509 || |||||||| |||||||||||||| | | |||| ||||| ||||| || || |||||| Sbjct 8214869 CCATATGCACCTTGCTCTGGAATCCACCAGCGGGCTATCTGTATTTATGGAGCTGGGGAC 8214928 Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGAT 108569 ||| | ||||| || || ||||||||||| ||||| |||||||||||||| | ||| ||| Sbjct 8214929 CTGCATTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGAT 8214988 Query 108570 GATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAA 108629 ||||| || || |||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct 8214989 GATAATGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGCCATCTACGGGACTGAA 8215048 Query 108630 CTTTGAGCTGCACTGT-------------------GGGCCAGGGACTGTGCCAACATGCC 108670 || |||| |||||| |||| || |||||| | |||||||| Sbjct 8215049 CTCTGAGACACACTGTGAGAGAATTGCTACTTGTGGGGCAAGAGACTGTACAAACATGCC 8215108 Query 108671 CAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCCC 108730 ||| | | |||| || ||||| |||| ||| |||||| ||||||||||| ||||||| Sbjct 8215109 CAGAACTTCCTGGGACACCGTGGGCTGGGAGACCAGGGCTTTGGAATCCATGACATCCCC 8215168 Query 108731 CAGGGTCAGAGGGCTGCT-TTGA 108752 | | | | | |||||| |||| Sbjct 8215169 TAAGATGGGGGCGCTGCTATTGA 8215191 >seq15196 Length=3550818 Score = 132 bits (146), Expect = 3e-26 Identities = 569/885 (64%), Gaps = 27/885 (3%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| | || || || || || || || ||||| ||| | || Sbjct 811162 CCCCTTAGTAAAGAAGAGGCGCAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAA 811221 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| | || |||| ||| | ||| | ||| |||||||| | || || | Sbjct 811222 ATTGAAATGCTGGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 811281 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| || || ||| | ||| || || || | || |||| ||||| Sbjct 811282 CACGTGGACAGAAAATCAGAGGAGTCCTTCTTAGCTGCAGTGATGGGCATTGCGTCCTGT 811341 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| ||||||||| |||||||| || ||| ||||||||||| || ||| | Sbjct 811342 TTCAGTAATGTCTTCGTGGCCAGTCAGCTGGAGAGTGTGGTTTATGCATCTTGGAGTCGG 811401 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTG--CCATGGAAGT 107985 || || || || || ||||| ||| | ||| | || |||| | |||| || ||||||| Sbjct 811402 GTTCAGGCCGATCTCAACTGCATGAAGGACCT-CTACAGA-ATGAGTGCACCCTGGAAGT 811459 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 ||||| | ||| ||||| | || || || || || ||||| || || ||| | Sbjct 811460 ACTTAATAAATCTTTGCGGTATGGATTTTCCTATTAAAACCAACCTAGAAATTGTCAGGA 811519 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG---AGGTACCTTCTGAGTCCa 108102 |||||| ||| | |||| | |||| | || | | || | || || | | Sbjct 811520 AGCTCAAGTCGTTCATGGGTGAAAACAACCTTGAAACCGAGAAGATGCCCTCCAA---TA 811576 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGTACCCTACCAGCA 108159 || || | | |||||| | || |||| || || | | | ||| | || | | Sbjct 811577 AAGAAGAAAGGTGGAAAAAGCGGTATGCAGTTGTTAATGGAAAGCTGACCAACACGGGGA 811636 Query 108160 AGATGAA---GGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTG 108216 | || | ||||| | ||| | ||| | || |||| | ||||||||||| Sbjct 811637 CTGTCAAAATGCGTCCTCCACTTGAAA---CACCTCTTTTTTCAGGCAGTGCCTATTTTG 811693 Query 108217 TGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTG 108276 ||| | | | | || |||| |||| || ||| ||||| | | | Sbjct 811694 TGGTCAGCAGGGAGTACGTGGGGTATGTGCTAGAGAATGAAAAAATCCAAAAGTTTATGG 811753 Query 108277 AATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTC 108336 | |||| | |||||||| ||||| || || | ||||||||||| | || | | || Sbjct 811754 AGTGGGCGCAGGACACCTACAGCCCGGATGAGTATCTCTGGGCCACTATCCAAAG-GATC 811812 Query 108337 CGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGACT 108392 | | | | ||||||||| | |||| ||||| ||||| || | || |||||| Sbjct 811813 CCGGAAGTCCCTGGCTCTCTCTCCTTGAGCCA---TAAGTACGACTTGTCTGACATGCAG 811869 Query 108393 GCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCT 108452 || | |||||| | ||||||||||||||| | ||||| || || | ||| || || Sbjct 811870 GCAGTTGCCAGGTTTGTCAAGTGGCAGTACTATGAGGGTGACATCTCTAAGGGTGCTCCC 811929 Query 108453 TATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTG 108512 || |||||||| ||| |||| | | | | ||||||| || || || ||| || Sbjct 811930 TACCCACCCTGCGATGGCGTCCACGTGCGCTCGGTGTGCATTTTTGGAGCTGGAGACTTG 811989 Query 108513 TACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 ||||||| || | || || ||| | || || || ||||| ||| Sbjct 811990 AACTGGATGCTGCGCAAGCACCACTTGTTTGCCAATAAGTTCGAC 812034 >seq4558 Length=3812649 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/305 (67%), Gaps = 12/305 (4%) Strand=Plus/Plus Query 107730 ATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCT 107789 ||||| |||| || | |||| | |||||| |||| | | || | || | || Sbjct 3768695 ATGGTCATCCACAAGGACTTTGATACATTTGAAAGGCTCTTCAGGGCTATTTACACTCCC 3768754 Query 107790 CAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTC 107849 |||||||| ||||| || || ||||||| |||| |||||| |||||||||| || || Sbjct 3768755 CAGAACATCTACTGCGTTCATGTGGATGAGAAGGCCCCAGCAGCTTTCAAAGATGCTGTT 3768814 Query 107850 AAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGT 107908 | | || | ||||||| | |||| ||| |||| ||| || | ||||| Sbjct 3768815 G-GAAAACTACTGAGCTGCTTCTCAAATGCCTTTGTGGCTTCAAAGAGGGAGTCTGTGGT 3768873 Query 107909 TTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGA-CTTG----CTC 107963 |||||| ||||| | || |||||||| ||||| || |||| |||| ||| Sbjct 3768874 TTATGCAGGAATTTCCAGGCTCCAGGCTGACCTCAACTGCCTGCAAGATCTTGTCACCTC 3768933 Query 107964 CAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAG 108023 | ||| || || ||||||||| | || || || ||| |||||||||| | || Sbjct 3768934 C-GAG----GTTCCCTGGAAGTACGCCATCAACACCTGTGGGCAAGACTTCCCCCTGAAA 3768988 Query 108024 ACCAA 108028 ||||| Sbjct 3768989 ACCAA 3768993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348173132628486