Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2225 82.4 5e-11 >seq2225 Length=8022615 Score = 82.4 bits (90), Expect = 5e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || |||||| || | ||||| | |||||||| | || |||||||| Sbjct 9673 GCCTTTGCCGCAGTGGAAGGCATCTTCTTTTCCTGTTCATTTGCATCAATGTTCTGGCTC 9614 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||| | || ||||| | | |||| | | || | |||||| | || || Sbjct 9613 AAGAAATGGGGACTGATGCCCCACCTCACATTTTACTATGAACTTATTAGCAGAGATGAG 9554 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 ||| |||||||||||||||| || || ||| | || ||| | ||||||| Sbjct 9553 GGTTTACACTGTGACTTTGCCTGCCTGATGTCCAAACATCTGGTACACAAACC 9501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356135744745217