Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq15718 181 2e-40 seq20862 150 4e-31 seq20873 134 3e-26 seq2891 123 6e-23 seq14751 118 2e-21 seq7335 116 9e-21 seq11110 114 3e-20 seq15540 113 1e-19 seq14096 107 4e-18 seq15174 105 2e-17 seq21428 102 2e-16 seq15997 98.7 2e-15 seq20430 93.3 1e-13 seq19918 84.2 5e-11 >seq15718 Length=2773767 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| || ||||| Sbjct 1504882 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCC 1504941 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || ||||||||||| || || || ||||||||||| |||||||| |||||||| Sbjct 1504942 AGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 1505001 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| ||||| ||||| |||| || || |||||||| Sbjct 1505002 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGTCTTC 1505061 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| ||||||||||| |||||||| ||| Sbjct 1505062 CCTGTAAGGGTTTTTACAAAAATCTGCATGTTG 1505094 >seq20862 Length=464634 Score = 150 bits (166), Expect = 4e-31 Identities = 148/190 (78%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 104367 ATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAA 104426 || |||| ||||| || ||||||||| ||| || ||||| ||||| || ||||||| Sbjct 291814 ATGCTTT-TGAATGTTGTAGTCAGATGAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAA 291756 Query 104427 AAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACAT 104486 | || || || || ||||||||||| |||||||| |||||||| ||||| || ||||||| Sbjct 291755 ATATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACAT 291696 Query 104487 TTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 ||||| ||||| ||||| |||| || || || ||||| || ||||| ||||||| Sbjct 291695 TTTCTGTAGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTTA 291636 Query 104547 CAAATATCTG 104556 | || ||||| Sbjct 291635 CGAAAATCTG 291626 >seq20873 Length=9479699 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||| || || | |||||||| ||||| | || ||||| || || || || ||||| Sbjct 8324333 TCTTTGTGGATGCTGTAGTCAGAAAGAGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAG 8324392 Query 104429 ATTAGCCTCTGTTGATCAGGAGGT-ATTCCTTCTTTATCCTGAATCTTTG--CTTTTACA 104485 || |||| ||| || ||||| || || |||||||||||||||||||| | | || ||| Sbjct 8324393 ATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTTATCCTGAATCTTGGCCCCTTCACA 8324452 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 || || | |||||| || || || ||||| || || || ||||| || || || || || Sbjct 8324453 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 8324512 Query 104546 ACAAATATCTGCATTTTG 104563 ||||| || ||||||||| Sbjct 8324513 ACAAAGATTTGCATTTTG 8324530 >seq2891 Length=6317780 Score = 123 bits (136), Expect = 6e-23 Identities = 126/164 (77%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || ||||| || ||||||| || | || ||||| ||||| || ||||||||| Sbjct 1420444 TCCTTTTGAATGTTGCAGTCAGA----GTACATCCATCTTCCAGTTGCTTGCCAGCAAAA 1420389 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 ||||| || || ||||||||||| |||||||| |||||||| ||||| || ||||||||| Sbjct 1420388 ATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTAGCCTTTACATTT 1420329 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACC 104532 |||| |||| ||||| |||| || || || ||||| || Sbjct 1420328 TCTATTATATCCAAGGGTTCAACCTTGAGAGTGATGGTCTTCCC 1420285 >seq14751 Length=4352773 Score = 118 bits (130), Expect = 2e-21 Identities = 160/226 (71%), Gaps = 13/226 (6%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| || || || || || ||||| || | |||||| | ||| | || ||||| Sbjct 1586272 ACAAGATGAAAAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTCCATCCATCTTCC 1586331 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCT-- 104468 ||||| || ||||||||||| || | || |||| |||||| |||||||| | |||| Sbjct 1586332 AGTTGCTTGCCAGCAAAAATCAGTTTTTGCTGATAAGGAGGAATTCCTTCCTCCTCCTCC 1586391 Query 104469 -----------GAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAG 104517 ||||||| ||||||||||||| || || || ||||| ||||| || Sbjct 1586392 TCCAAGATGTGGAATCTTGGCTTTTACATTTTATATTGTGTCCAAGGGTTCAACCTCGAG 1586451 Query 104518 TGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || |||| ||||||| || |||||||| ||| Sbjct 1586452 AACGATGGTCTTCCCCATAAGGGTTTTTATGAAAATCTGCATCTTG 1586497 >seq7335 Length=6127795 Score = 116 bits (128), Expect = 9e-21 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 104338 TCTTAGC--CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGA 104395 ||||||| || | || |||| | || || || || |||| || |||||||| ||| Sbjct 5714267 TCTTAGCACCTCAACACAAGATAAAGAGTGGACTCCTTTTGAACTTTGTAGTCAGACAGA 5714326 Query 104396 GTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATT 104455 || |||||||| ||||| |||||||| | || | || ||||||||||| ||| Sbjct 5714327 AAATGTCCATCTTCTAGGTGTTTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATT 5714386 Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||| |||||||| || || || || | ||| |||| ||||| ||||| || | Sbjct 5714387 TCTTCCTTATCCTGGATTTTGGCCTTCATATTGTCTATTGTATCCAGGGGTTCAACTTTG 5714446 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || || || ||||| | ||||| || |||||||||||| Sbjct 5714447 AGAGTGATGGTTTTCCCTGTAAGGGCTTTTATGAAAATCTGCATTTTG 5714494 >seq11110 Length=21012544 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 || ||||| | || || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 1790541 GGGGAAAGAGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCT 1790600 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| |||||| ||||||| ||||| |||||||| || | ||||| || || ||| | Sbjct 1790601 GCTATATTTTGGCTGAAGAAGAGAGGTCTTATGCCTGGGCTCACTTTTTCCAATGAACTC 1790660 Query 269246 ATAAGCAGGGACGAAG 269261 || ||||| || |||| Sbjct 1790661 ATCAGCAGAGATGAAG 1790676 >seq15540 Length=10794444 Score = 113 bits (124), Expect = 1e-19 Identities = 126/169 (75%), Gaps = 7/169 (4%) Strand=Plus/Plus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| || ||||||||||| || || || || ||||| || |||||||| Sbjct 10655426 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGGTGGAATTCCTTCC 10655485 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCT-------ACGGTATCGCTAGGTTCTACCTC 104514 ||||||| ||||| || |||||||||||| | ||||| ||||| |||| Sbjct 10655486 CTATCCTGGATCTTGGCCTTTACATTTTCTCAGATACATTGTATCCGAGGGTTCAACCTG 10655545 Query 104515 TAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || ||||| || ||||| | ||||| || |||||||| ||| Sbjct 10655546 GAGAGTGATGGTCTTCCCTGTAAGGGATTTTATGAAAATCTGCATCTTG 10655594 >seq14096 Length=10606831 Score = 107 bits (118), Expect = 4e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553 |||||||| | | | ||||||||| | || || | || ||| | || || ||||| | Sbjct 8595279 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACTGTGTTTTTTATCCTGAGG 8595220 Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTACTTTG 78613 |||||| || ||| || ||| || |||||||||||||| | ||| |||||||| ||| Sbjct 8595219 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 8595160 Query 78614 GGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650 | ||||| || ||||| ||| | ||||| ||||||| Sbjct 8595159 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAAG 8595123 >seq15174 Length=1580434 Score = 105 bits (116), Expect = 2e-17 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 65753 ATCGCCTTTACATATATTAAACTCCTCCTTACCGAAATTAAATATTAATATTCCAACATT 65812 ||| ||||| || | ||||| || || || |||||||| | || | |||||||| Sbjct 203855 ATCACCTTTTTTTACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATT 203796 Query 65813 ACCTCTATAGTCTGAATCTATAACACCAGCACCTACATCTATAAAGTAATTATACGCTAA 65872 |||||||| ||| |||||| |||||||| |||||||||||||| | || || || Sbjct 203795 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATAAAATGTTTGGCAGCCAA 203736 Query 65873 TCCAGATCGGGGAGCTATTCTACCATAATATCCTCTAGGAACTGATATAATCAAATCAGT 65932 ||||| || ||||||| ||| || ||| |||| ||||| | ||| | || || Sbjct 203735 GCCAGAACGTGGAGCTACTCTTCCGTAACATCCAGCAGGAAGAGCTATCTGAATGTCTGT 203676 Query 65933 AAATACCAATTCTTTGTCCATGGGTTGTACGGTATAATCGTACGCGCTATATAGATCATA 65992 || | ||| ||||| | | ||| || ||||| || || || || || || || Sbjct 203675 CTTCACAACAGTTTTCTCCATAGATGGTATTGTGTAATCATAGGCACTGTACAGGTCGTA 203616 Query 65993 TCCTGCAGCCC 66003 || ||||||| Sbjct 203615 GCCCGCAGCCC 203605 >seq21428 Length=20122155 Score = 102 bits (112), Expect = 2e-16 Identities = 254/382 (66%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 65626 ATTTTCATTTTACTCCAGTAGAACCAAAACCACAGGACCCTCTTTCTGTTATATCTATAG 65685 ||||| ||| | |||||| ||||||||||| | || || ||||| || ||| | | Sbjct 2236111 ATTTTAATTCTT-TCCAGTGGAACCAAAACCTCCTGAACCCCTTTCAGTGTCATCCAAAA 2236053 Query 65686 CATCTACAGAAAGAGCCTCCCTTATTTCTGGTTGTGCTATTTTTTCAAATATGATTTGAG 65745 | | || | || ||||||||| | || |||| | |||| || | Sbjct 2236052 CTT---------GAACTTCTTCTATTTCTGGATAAAAAATCCATTCACAAATGAGCTGCG 2236002 Query 65746 CTACTCTATCGCCTTTACATATATTAAACTCCTCCTTACCGAAATTAAATATTAATATTC 65805 | | | ||| ||||| || | ||||| || || || |||||||| | || | | Sbjct 2236001 CAATCCAATCACCTTTTTTTACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACAC 2235942 Query 65806 CAACATTACCTCTATAGTCTGAATCTATAACACCAGCACCTACATCTATAAAGTAATTAT 65865 ||||||| |||||||| ||| |||||| |||||||| |||||||||||||| | || Sbjct 2235941 CAACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATAAAATGTTTGG 2235882 Query 65866 ACGCTAATCCAGATCGGGGAGCTATTCTACCATAATATCCTCTAGGAACTGATAT---AA 65922 || || ||||| | ||||||| ||| || ||| |||| ||||| | ||| || Sbjct 2235881 CAGCCAAGCCAGAACATGGAGCTACTCTTCCGTAACATCCAGCAGGAAGAGCTATCTGAA 2235822 Query 65923 T-CAAATCAGTAAATACCAATTCTTTGTCCATGGGTTGTACGGTATAATCGTACGCGCTA 65981 | ||| | | | || | ||| ||||| ||| ||| || ||||| || || || Sbjct 2235821 TGTCTATC--TTCACAACAGT--TTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTG 2235766 Query 65982 TATAGATCATATCCTGCAGCCC 66003 || || | || || ||||||| Sbjct 2235765 TACAGGTTGTAGCCCGCAGCCC 2235744 >seq15997 Length=2641812 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||| || || || |||||||| | || | || ||||| ||||||| ||||||| Sbjct 1608971 TCTTCTTGCATGTTGTAGTCAGACAAAGCACCTCCATCTTCCAGTTGTTG-CCAGCAACG 1608913 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATT-CCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 | || || || |||||||||| ||| |||| |||||||| ||||| | |||||||| Sbjct 1608912 -TCAGTCTTTGCTGATCAGGAGAAATTTCCTTTCTTATCCTGGATCTTGGAGTTTACATT 1608854 Query 104488 TTCTACGGTATCGCTAG-GTTCTACCTCTAGTGT-AATAGTCTTACCAGTAAGTGTTTTT 104545 ||||| ||||| |||| |||| ||| | || | | ||||| || | ||| ||||| Sbjct 1608853 TTCTATTGTATC-CTAGAGTTCAGCCTTGAAAGTGATTGGTCTTCCCTGCAAGGATTTTT 1608795 Query 104546 ACAAATATCTGCATTTTGTGTACAGT 104571 | || |||| ||||||| | |||| Sbjct 1608794 ATGAAAATCTACATTTTGGTTGCAGT 1608769 >seq20430 Length=457578 Score = 93.3 bits (102), Expect = 1e-13 Identities = 116/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || |||||| | | || ||||||| || || |||| ||||||||||| | ||||| Sbjct 387554 CCATCTTCTGGCTACTTCTCAGCAAAGATCAG--TCTGGTGATCAGGAGGGACGCCTTCC 387497 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || ||| ||| || ||||| || | ||| || || || || ||||| || || Sbjct 387496 TTGTCTTGGCTCTCTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTG 387437 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | ||| ||||| || || || ||||| |||||||| Sbjct 387436 ATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 387399 >seq19918 Length=441265 Score = 84.2 bits (92), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || |||||||| ||| |||||||||||||| ||| | |||| ||| |||| ||||| Sbjct 46955 GTAGAAAATCCATTTGACTTTATGGAGAATATTTCACTGCAAGGAAAGACTAACTTCTTT 46896 Query 269552 GAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATT 269611 |||||| | ||| | | ||||||| ||||| || ||||| | | | ||| ||| | Sbjct 46895 GAGAAGAGAGTAGGCGAATATCAGAGGATGGGAGTGATGTCAAGTCCAACAGAGAATTCT 46836 Query 269612 TTCACTACAGATGCAGAATTCTAA 269635 || || ||||| || |||||| Sbjct 46835 TTTACCTTGGATGCTGACTTCTAA 46812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151065898090612