Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq3891 158 1e-33 >seq3891 Length=6109150 Score = 158 bits (174), Expect = 1e-33 Identities = 126/152 (83%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | ||||||||||| ||||||||| |||| ||||||||| Sbjct 229889 GGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 229830 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 |||||||| || || ||||| || ||||||||||||||||| ||||| |||||||| ||| Sbjct 229829 CCGCAGGCTGAGAACCACGGCCCAGACATCAAAGAGCACGTGAACTCCCTGGGAGAGAAG 229770 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || |||||| | || | ||||| ||||| Sbjct 229769 CTGAAGACGCTGAGGCTGAGGCTGCGGCGCTG 229738 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151 |||||| || |||||| ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 227504 GCTGCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 227445 Query 129152 AGAATCATACATGAC 129166 |||| | |||||||| Sbjct 227444 AGAAGCCTACATGAC 227430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447624251921680