Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3891 136 3e-27 >seq3891 Length=6109150 Score = 136 bits (150), Expect = 3e-27 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| ||||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 229880 GGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCGCAGGCT 229821 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 229820 GAGAACCACGGCCCAGACATCAAAGAGCACGTGAACTCCCTGGGAGAGAAGCTGAAGACG 229761 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 |||| || | ||||| ||||| Sbjct 229760 CTGAGGCTGAGGCTGCGGCGCTG 229738 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || | |||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct 227505 AGCTGCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 227446 Query 127439 TCGAGACTTACATG 127452 | || | |||||| Sbjct 227445 TAGAAGCCTACATG 227432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429936266609768