Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3447 158 2e-34 >seq3447 Length=7800117 Score = 158 bits (174), Expect = 2e-34 Identities = 191/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || |||| ||| || || |||||||| || ||||| ||||| || ||| Sbjct 786865 GCTAAGCGCCACCGCAAGGTTCTGCGTGACAACATCCAGGGCATCACAAAGCCGGCCATC 786806 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||| || || || ||||||||||| ||||||| | | ||||| || | Sbjct 786805 CGGCGCCTGGCCCGCCGCGGCGGAGTCAAGCGCATCTCTGGCCTCATTTATGAGGAAACC 786746 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||| | ||||| ||| || |||| |||||| || || || ||| Sbjct 786745 CGTGGGGTGCTCAAGGTGTTCCTGGAGAATGTGATCCGGGATGCTGTCACTTACACGGAG 786686 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || |||||||||||||| ||||||| | ||||| || | ||||| || ||| Sbjct 786685 CACGCAAAGCGTAAGACTGTCACGGCCATGGACGTGGTCTACGCGCTTAAACGACAGGGC 786626 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | |||||||| || Sbjct 786625 CGTACCCTGTATGGTTTCGG 786606 Score = 156 bits (172), Expect = 7e-34 Identities = 203/278 (73%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| ||| || | | | || || |||||||| || || || || || ||||| Sbjct 1447202 GCTAAGCGTCACCGCAAGGTGT-TGCGGGACAACATCCAGGGCATTACAAAACCCGCTAT 1447260 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||| || ||||| || ||| | ||||| | |||| ||||||| Sbjct 1447261 CCGGCGTCTTGCTCGTCGCGGCGGAGTAAAACGTATTTCTGGTCTTATCTACGAAGAGAC 1447320 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || |||||| | || | ||| ||| |||| |||||| || || || || Sbjct 1447321 TCGCGGGGTGTTGAAGGTGTTTTTGGAGAACGTAATCCGCGATGCTGTCACTTACACGGA 1447380 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||||| || |||||||| || | |||||| | || ||||| |||| ||||| || Sbjct 1447381 GCATGCTAAGCGCAAGACTGTTACAGCTATGGATGTGGTATATGCGCTGAAGCGTCAGGG 1447440 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATC 16709 || | |||| || ||||| | ||||| | |||| Sbjct 1447441 ACGCACCCTTTACGGCTTTGGCGGCTAATCCTTAAATC 1447478 Score = 156 bits (172), Expect = 7e-34 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||||||||||||||||| || || |||||||| ||||| Sbjct 1600579 CGCAAAGCGCCACCGGAAAGTGCTTCGAGATAACATCCAGGGCATTACCAAGCCTGCTAT 1600638 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||| | ||||| || |||||||| ||||||| ||| |||| || |||| Sbjct 1600639 TCGACGCCTGGCAAGGCGTGGCGGTGTCAAGCGCATCTCTGGTTTGATCTACGAGGAGAC 1600698 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | || | ||||| ||| ||| || | || || || || ||||| Sbjct 1600699 GCGTGGGGTCCTTAAAGTTTTCCTGGAGAACGTGATTCGGGACGCCGTCACTTACACCGA 1600758 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || |||||||| ||||| |||||||| | |||||||| | || || ||||| Sbjct 1600759 ACACGCCAAGCGTAAGACAGTCACGGCCATGGATGTGGTCTATGCTCTCAAGCGCCAAGG 1600818 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | |||||||| || Sbjct 1600819 GCGCACTCTCTATGGTTTCGG 1600839 Score = 152 bits (168), Expect = 8e-33 Identities = 198/271 (73%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||| | | || || |||| |||||||| || |||||||| || ||||| Sbjct 1433370 GCTAAGCGGCATCGTAAGGTC-CTGAGAGACAACATCCAGGGTATCACCAAACCTGCTAT 1433312 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || | ||||| || || || ||||||||| | ||||| | ||||||| |||| Sbjct 1433311 CCGCCGCTTAGCTCGACGGGGCGGTGTCAAGCGTATTTCTGGCCTCATCTATGAGGAGAC 1433252 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || |||| | || || ||| ||||||| ||||| || || ||||| Sbjct 1433251 TCGTGGAGTACTGAAAGTTTTTCTGGAGAATGTTATCCGCGATGCCGTCACTTACACCGA 1433192 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || |||||||| || || | ||||| | ||||| || | || || || || Sbjct 1433191 GCACGCCAAGCGTAAGACGGTAACGGCTATGGACGTGGTCTACGCGCTTAAGCGACAGGG 1433132 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | ||||||||||||| |||| ||| Sbjct 1433131 GCGCACTCTTTATGGTTTTGGCGGTTAGTCT 1433101 Score = 152 bits (168), Expect = 8e-33 Identities = 192/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | | || || || |||||||| || ||||||||||| || || Sbjct 1605966 GCCAAGCGTCACCGTA-AGGTGTTACGTGACAACATCCAGGGCATCACCAAGCCGGCCAT 1605908 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || ||||| |||||||||||| |||| || || | || || |||| Sbjct 1605907 CCGGCGCCTAGCCCGGCGTGGCGGAGTCAAGCGTATCTCCGGTCTGATTTACGAGGAGAC 1605848 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || | ||| | ||| | ||| ||| |||| || ||| | || || || Sbjct 1605847 TCGTGGGGTGCTCAAGGTTTTCTTGGAGAACGTGATCCGGGACGCTGTAACATACACGGA 1605788 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| |||||||| ||||||| || | ||||| ||||| Sbjct 1605787 GCACGCCAAGCGCAAGACTGTCACAGCCATGGATGTCGTCTACGCCCTTAAACGCCAAGG 1605728 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| ||||| Sbjct 1605727 ACGCACCCTCTATGGCTTTGG 1605707 Score = 149 bits (164), Expect = 1e-31 Identities = 189/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| ||| || || |||||||| || ||||||||||| || ||| Sbjct 230631 GCCAAGCGCCATCGCAAGGTTCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCAATC 230572 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || |||| || ||||| ||||| ||||| |||| || | |||| || |||| | Sbjct 230571 CGGCGCTTGGCCCGCCGTGGCGGAGTTAAGCGCATCTCCGGTCTCATCTACGAGGAGACT 230512 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | ||||| ||| ||| |||| || ||| || ||| |||||| Sbjct 230511 CGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTAATCCGCGACGCTGTCACCTACACCGAG 230452 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| || ||||| |||||| ||||||| | ||||| || | || || || || Sbjct 230451 CACGCTAAGCGGAAGACGGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGT 230392 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 230391 CGCACTCTCTACGGCTTTGG 230372 Score = 145 bits (160), Expect = 1e-30 Identities = 188/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| ||| || || |||||||| || ||||||||||| || ||| Sbjct 224338 GCCAAGCGCCACCGCAAGGTTCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCAATC 224397 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || |||| || ||||| ||||| ||||| |||| || | |||| || |||| | Sbjct 224398 CGGCGCTTGGCCCGCCGTGGCGGAGTTAAGCGCATCTCCGGTCTCATCTACGAGGAGACT 224457 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | ||||| ||| ||| |||| || ||| || ||| |||||| Sbjct 224458 CGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTAATCCGCGACGCTGTCACCTACACCGAG 224517 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| || ||||| |||||| ||||||| | ||||| || | || || || || Sbjct 224518 CACGCTAAGCGGAAGACGGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGT 224577 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 224578 CGCACTCTCTACGGCTTTGG 224597 Score = 127 bits (140), Expect = 3e-25 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || || ||||| || || ||||| |||||||| || || || || || Sbjct 1539794 GACAACATCCAGGGCATTACCAAACCCGCAATCCGGCGTCTGGCCCGGCGAGGAGGTGTT 1539735 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| | ||||| | |||| || |||| || | ||| | ||| | || || || Sbjct 1539734 AAGCGCATTTCTGGTCTCATCTACGAGGAGACGCGGGGTGTGCTTAAGGTTTTTCTGGAG 1539675 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||||| | ||| ||| || ||| || ||||||||||| || |||||||| ||| | Sbjct 1539674 AATGTTATTCGTGACGCTGTCACCTACACAGAGCACGCTAAGCGAAAGACTGTTACCGCT 1539615 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| | ||||| || || || | | || || |||||| | ||| Sbjct 1539614 ATGGATGTAGTTTATGCGCTAAAACGCCAGGGGCGCACTCTCTACGGCTTTGGAGGCTAA 1539555 Score = 125 bits (138), Expect = 1e-24 Identities = 186/261 (71%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || || | | |||| || || || ||||| || |||||||| || || || Sbjct 1385443 GCTAAGCGCCACCGTA-AGGTCTTGCGTGACAATATCCAGGGTATCACCAAACCTGCAAT 1385385 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | ||||| |||||||| || ||||| | || || | |||||||||||| Sbjct 1385384 TCGTCGTTTAGCTCGCCGTGGTGGTGTTAAGCGCATTTCCGGCCTCATCTATGAAGAGAC 1385325 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | || | || || ||| ||| || | |||||| | ||| || || Sbjct 1385324 TCGGGGTGTGCTCAAAGTGTTTCTGGAGAACGTGATTCGGGATGCTGTTACCTACACGGA 1385265 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||||| ||||| || || | ||||| | ||||| ||| | || || || || Sbjct 1385264 ACACGCTAAACGCAAGACGGTGACGGCTATGGACGTTGTCTACGCACTCAAGCGCCAGGG 1385205 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | |||| || ||||| Sbjct 1385204 ACGCACTCTTTACGGCTTTGG 1385184 Score = 120 bits (132), Expect = 5e-23 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | || || || |||||||| || || || || || ||||| Sbjct 1346414 CGCTAAGCGTCACCGTAAGGTGCTGCGGGACAACATCCAGGGGATTACTAAACCTGCTAT 1346473 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||| || ||||| || ||||| | ||||| || | |||||||| | Sbjct 1346474 TCGGCGTCTTGCTCGGCGCGGTGGTGTTAAGCGCATTTCTGGCCTGATTTATGAAGAAAC 1346533 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | ||| | ||||| ||| || |||| ||| ||| || || || || Sbjct 1346534 TCGCGGGGTTCTCAAGGTTTTCCTGGAGAATGTGATCCGTGACGCTGTCACTTACACGGA 1346593 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || ||||| || || |||||||| | || || || | || || || || Sbjct 1346594 GCATGCGAAGCGGAAGACGGTGACTGCCATGGATGTGGTGTACGCTCTCAAGCGACAGGG 1346653 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| || || Sbjct 1346654 GCGCACTCTCTATGGCTTCGG 1346674 Score = 118 bits (130), Expect = 2e-22 Identities = 184/261 (70%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||||| | | || || | ||||| || |||||| ||| || || Sbjct 180983 CGCCAAGCGTCACCGCAGAGTTTTACGTGACAT-ATCCAGGGTATCACCGAGCTTGCCAT 181041 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| || || |||||||| || || ||||| | ||||| | | ||||| || | Sbjct 181042 CCGTCGCCTAGCCCGTCGTGGAGGCGTTAAGCGCATTTCTGGCCTCATTTATGAGGAAAC 181101 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||| |||| ||| || |||| ||| || || ||| || || Sbjct 181102 GCTCGGAGTTCTTAAGGTCTTGG---AGAATGTGATCCGTGACGCCGTCACCTACACGGA 181158 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| ||||||||||||||||| ||||||| | || || || | ||||| || || Sbjct 181159 GCACGCCAAACGTAAGACTGTCACGGCCATGGACGTGGTTTACGCGCTCAAACGCCAGGG 181218 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | | ||||| || || Sbjct 181219 TCGCACGCTCTATGGCTTCGG 181239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79054592434527