Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq15718 87.8 2e-12 seq15374 86.0 6e-12 seq20429 82.4 7e-11 >seq15718 Length=2773767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | ||||||||||| | || || || | ||||| || | | ||| | Sbjct 1505094 CAACATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACTATCACTCTCAAGGTTGAACC 1505035 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || || || | || || ||||| || || ||||| || ||||| || Sbjct 1505034 CTCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1504975 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACT 26943 ||| |||||||| |||| | ||||| ||||| ||||||| | | || | | |||| Sbjct 1504974 TCAGCAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGG-ACATACTTTGTCTGACT 1504916 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 1504915 ACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1504864 >seq15374 Length=4994092 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 |||||||||| | ||||| || || | ||||| || | |||||| | || | || | Sbjct 172680 CAAAATGCAAATTTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCC 172739 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | ||||||||||||| | || ||| ||||| || || |||||||| || || || Sbjct 172740 CAGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCCCCTGA 172799 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||||| || || ||||||| | | | ||||| Sbjct 172800 CCAGCAGCGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTA 172859 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||| || ||||| || || | || ||||||||| Sbjct 172860 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTG 172896 >seq20429 Length=9870158 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || | || || || | |||||| |||| | || | | Sbjct 2401157 AATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 2401216 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| |||||| ||||| || || || ||||||||||| Sbjct 2401217 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCA 2401276 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || || || | | || || || || ||||||| | | | | ||||| || Sbjct 2401277 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2401336 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || || || || || | || ||||| || | || ||||| || Sbjct 2401337 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGAGGTGG 2401384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478527542852080