Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq15718 105 4e-18 seq18095 95.1 8e-15 seq7335 87.8 1e-12 >seq15718 Length=2773767 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| ||||||||| | || | || Sbjct 1504878 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATC 1504937 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 1504938 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1504997 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| | | || ||||| Sbjct 1504998 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGT 1505057 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||| || || ||||||||||| Sbjct 1505058 CTTCCCTGTAAGGGTTTTTACAAAAATCTGCATGTT 1505093 >seq18095 Length=15613165 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||| ||| ||| |||| ||||| || |||||| | Sbjct 11496475 AAGCCCATTCCCTTGGCTGTGGTTTTGCTGGATCGTAGGTAGGGACAGTGGGAATCTCAT 11496534 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | || | ||||| ||||||||||||||||||||| Sbjct 11496535 TCATGCATTCATATGCGTCACTAATTAGATGACGA 11496569 >seq7335 Length=6127795 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | || ||||||| ||||||||||| ||||| ||||||| || | || | || Sbjct 5714278 CAACACAAGATAAAGAGTGGACTCCTTTTGAACTTTGTAGTCAGACAGAAAATGTCCATC 5714337 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 |||| ||||| || ||||| | || ||| ||||| | || | |||| || || Sbjct 5714338 TTCTAGGTGTTTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTTATC 5714397 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||||| ||||| ||| | | ||||| |||||||| | || || || Sbjct 5714398 CTGGATTTTGGCCTTCATATTGTCTATTGTATCCAGGGGTTCAACTTTGAGAGTGATGGT 5714457 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| || || | || ||| | ||| |||||||| || Sbjct 5714458 TTTCCCTGTAAGGGCTTTTATGAAAATCTGCATTTT 5714493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334855191992909