Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19918 84.2 4e-11 seq2225 84.2 4e-11 >seq19918 Length=441265 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||||||| | || || || ||||||||||| || || | || || || || |||||| Sbjct 48807 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 48748 Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | ||| | ||||||||| ||||| || || || ||||| || ||||| || Sbjct 48747 CTCAAGAAACGAGGACT-GATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 48689 Query 42827 CGAGG 42831 |||| Sbjct 48688 TGAGG 48684 >seq2225 Length=8022615 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 ||||||| |||| || || ||||||||||| || | | || || || || |||||||| Sbjct 9674 AGCCTTTGCCGCAGTGGAAGGCATCTTCTTTTCCTGTTCATTTGCATCAATGTTCTGGCT 9615 Query 42770 CAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 |||| | | || | | ||||||| ||||| || | | ||||| || ||||| || | Sbjct 9614 CAAGAA-ATGGGGACTGATGCCCCACCTCACATTTTACTATGAACTTATTAGCAGAGATG 9556 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCT 42856 |||| | || | |||||||||||||| Sbjct 9555 AGGGTTTACACTGTGACTTTGCCTGCCT 9528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944073144234640