Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23]
22,539 sequences; 2,798,152,141 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq15374 89.7 5e-13
seq20429 84.2 2e-11
seq15718 82.4 8e-11
>seq15374
Length=4994092
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || || ||||||||||| | ||| ||| || || || || || || | |
Sbjct 172877 GACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCCAGCTGCTTGCCTGCA 172818
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| ||||| || || || ||||| || || ||| || ||| |
Sbjct 172817 AAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTTATCCTGGATCTTGGCTTTCACA 172758
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| | | ||||||||| | || | || || |||||||| || ||
Sbjct 172757 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 172698
Query 138601 ACAAAAATCTGCAT 138614
|||||||| |||||
Sbjct 172697 ACAAAAATTTGCAT 172684
>seq20429
Length=9870158
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || ||| || || || || || || | |
Sbjct 2401351 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCA 2401292
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | ||| || || ||||| || || || ||||| ||| ||| || |
Sbjct 2401291 AAGATCAGCCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACA 2401232
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| | | ||| ||||||| || | || || || ||||| || ||
Sbjct 2401231 TTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 2401172
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 2401171 ACAAAGATCTGCAT 2401158
>seq15718
Length=2773767
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || |||| | || || ||||| || || | |
Sbjct 1504897 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCA 1504956
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || || | || || || ||||| || ||||| || || ||| || ||||
Sbjct 1504957 AAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 1505016
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| ||| | || || | | || |||| || || | || || || || || ||||||
Sbjct 1505017 TTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGTCTTCCCTGTAAGGGTTTTT 1505076
Query 138601 ACAAAAATCTGCATG 138615
|||||||||||||||
Sbjct 1505077 ACAAAAATCTGCATG 1505091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496122584272080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |