Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq15374 89.7 5e-13 seq20429 84.2 2e-11 seq15718 82.4 8e-11 >seq15374 Length=4994092 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | ||| ||| || || || || || || | | Sbjct 172877 GACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCCAGCTGCTTGCCTGCA 172818 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || ||||| || || ||| || ||| | Sbjct 172817 AAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTTATCCTGGATCTTGGCTTTCACA 172758 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||||||||| | || | || || |||||||| || || Sbjct 172757 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 172698 Query 138601 ACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 172697 ACAAAAATTTGCAT 172684 >seq20429 Length=9870158 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || ||| || || || || || || | | Sbjct 2401351 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCA 2401292 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| || || ||||| || || || ||||| ||| ||| || | Sbjct 2401291 AAGATCAGCCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACA 2401232 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| || | || || || ||||| || || Sbjct 2401231 TTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 2401172 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 2401171 ACAAAGATCTGCAT 2401158 >seq15718 Length=2773767 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || |||| | || || ||||| || || | | Sbjct 1504897 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCA 1504956 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || | || || || ||||| || ||||| || || ||| || |||| Sbjct 1504957 AAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 1505016 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | || |||| || || | || || || || || |||||| Sbjct 1505017 TTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGTCTTCCCTGTAAGGGTTTTT 1505076 Query 138601 ACAAAAATCTGCATG 138615 ||||||||||||||| Sbjct 1505077 ACAAAAATCTGCATG 1505091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496122584272080