Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq15374 150 4e-31 seq15718 136 9e-27 seq1558 132 1e-25 seq1 132 1e-25 seq20873 120 7e-22 seq20429 120 7e-22 seq2224 109 1e-18 seq2891 98.7 2e-15 seq14751 95.1 3e-14 seq15540 93.3 1e-13 seq20862 87.8 4e-12 >seq15374 Length=4994092 Score = 150 bits (166), Expect = 4e-31 Identities = 165/219 (75%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || |||||||| || |||| ||||||||||| | ||| | ||||| Sbjct 172896 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATC 172837 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || |||||||| ||||||||||| || || ||||| || Sbjct 172836 TTCCAGCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTTATC 172777 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| |||| |||||| | | || || |||| ||||| || Sbjct 172776 CTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 172717 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || || || || |||||||||||||| |||||| Sbjct 172716 CTTGCCAGTCAGGGTCTTCACAAAAATTTG---CATTTT 172681 >seq15718 Length=2773767 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 1504870 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 1504929 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||||||| ||||| || || || || || | ||||| || ||| ||||||| Sbjct 1504930 TGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCT 1504989 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || || | | ||| || | | Sbjct 1504990 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGA 1505049 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| |||||||| || Sbjct 1505050 GTGATAGTCTTCCCTGTAAGGGTTTTTACAAAAATCTG 1505087 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| || || || || ||||| ||||||||||| |||||| | || |||||| Sbjct 1504969 AAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACA 1504910 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||| ||||| ||||||||||| Sbjct 1504909 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 1504870 >seq1558 Length=6673444 Score = 132 bits (146), Expect = 1e-25 Identities = 163/220 (74%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| ||||||||||| | ||| | |||||| Sbjct 2790688 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCT 2790629 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| | || |||||||| |||||||| || || || ||||| ||| Sbjct 2790628 TCCAGCTGCTTGCATGCAAAGATGAGCCGCTGCTGATCAGGGGGGATGCCTTCCTTATCC 2790569 Query 199538 TGAATCTTTTGCTTCACGGATTC--GACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 || ||||| |||||| |||| || ||||| | | || || |||| ||||| | Sbjct 2790568 TGGATCTTGGCCTTCAC--ATTCTTGATGGTGTTGCTGGGCTCCACCTCCAGGGTGATGG 2790511 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||| || || || || |||||||| ||||| |||||| Sbjct 2790510 TCTTGCCGGTCAGGGTCTTCACAAAGATTTG---CATTTT 2790474 >seq1 Length=29265399 Score = 132 bits (146), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| || || || |||||||| || |||| ||||||||||| | ||| | ||||| Sbjct 23783142 CAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATC 23783083 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| |||||| || || |||||||| ||||||||||| || || ||||| || Sbjct 23783082 TTCCACCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGG-GGGATCCCTTCCTTATC 23783024 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| |||| |||||| | | || || |||| ||||| || Sbjct 23783023 CTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 23782964 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || || || || |||||||| ||||| |||||| Sbjct 23782963 CTTGCCGGTCAGGGTCTTCACAAAGATTTG---CATTTT 23782928 >seq20873 Length=9479699 Score = 120 bits (132), Expect = 7e-22 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||| |||| || |||| | ||||||||| | ||| | |||||| Sbjct 8324312 AGGACCAGGTGCAGGGTCTACTCTTTGTGGATGCTGTAGTCAGAAAGAGTGCGCCCATCT 8324371 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC-CGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || || |||||||| | ||||||||| || || |||||| || Sbjct 8324372 TCCAGCTGCTTGCCTGCAAAGATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTTATC 8324431 Query 199537 CTGAATCTT--TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||||||| |||||| || | ||| || | | || || |||| ||||| Sbjct 8324432 CTGAATCTTGGCCCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATG 8324491 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| || || || || |||||||| ||||| |||||| Sbjct 8324492 GTCTTGCCGGTCAGGGTCTTCACAAAGATTTG---CATTTT 8324529 >seq20429 Length=9870158 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||||| |||| ||||||||||| || || | |||||| Sbjct 2401369 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2401310 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || | |||||| || ||| || || || || Sbjct 2401309 TCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCT 2401250 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 2401249 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTC 2401190 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || |||||||| || || Sbjct 2401189 TTGCCCGTCAGGGTCTTCACAAAGATCTG 2401161 >seq2224 Length=17281721 Score = 109 bits (120), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT--CCAT 199475 ||||| ||||| || || ||||| ||||||| ||||||||||| |||| | | |||| Sbjct 757881 AGGACCAGGTGCAGGGTTGACTCTTTTTGGATGTTGTAGTCAG--AAAGAGCGTGCCCAT 757938 Query 199476 CTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCT 199535 ||||||||| ||| || || |||||||| ||||||||||| ||| | ||||| | Sbjct 757939 CTTCCAGCTACTTACCTGCAAAGATGAGCCGCTGCTGGTCAGGAGGGGTCCCTTCCTTAT 757998 Query 199536 CCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 |||| ||||| |||| | || | |||||| | | || || |||| | ||| | Sbjct 757999 CCTGGATCTTGGCCTTCTCATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGCGATGG 758058 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || || ||||| || Sbjct 758059 TCTCGCCAGTCAGGGTCTTGACGAAAATCTG 758089 >seq2891 Length=6317780 Score = 98.7 bits (108), Expect = 2e-15 Identities = 103/135 (76%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| |||||||| ||||| |||||||||| | |||| |||||| ||| | Sbjct 1420472 AAGTCTCAACACAAGGTGAAGAGTGCACTCCTTTTGAATGTTGCAGTCAG----AGTACA 1420417 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| || || || || || | ||||| || ||| ||||||||| Sbjct 1420416 TCCATCTTCCAGTTGCTTGCCAGCAAAAATTAGTCTTTGCTGATCAGGAGGAATTCCTTC 1420357 Query 199531 TCGCTCCTGAATCTT 199545 ||||| ||||| Sbjct 1420356 CTTATCCTGGATCTT 1420342 >seq14751 Length=4352773 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||||| || | ||| ||||||||||| | ||||| ||||| |||||||| ||| Sbjct 1586265 TCTCAACACAAGATGAAAAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTCCATCC 1586324 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||||| ||||| || || || || || ||||| | ||| ||||||||| Sbjct 1586325 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTTTTTGCTGATAAGGAGGAATTCCTTCCTC 1586384 Query 199534 CTCCT 199538 ||||| Sbjct 1586385 CTCCT 1586389 >seq15540 Length=10794444 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||| | Sbjct 10655370 AGTCTCAACACAAGATTAAGAGTGGACTCCTTTTGAATGTTGCAGTCA----AAGTATGT 10655425 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || || || || | |||||||| || ||||||||| Sbjct 10655426 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGGTGGAATTCCTTCC 10655485 Query 199532 CGCTCCTGAATCTT 199545 | ||||| ||||| Sbjct 10655486 CTATCCTGGATCTT 10655499 >seq20862 Length=464634 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 199441 CTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 199500 |||||| | ||||||||||| |||| |||||||||||| ||||| || || || || Sbjct 291811 CTTTTGAATGTTGTAGTCAGATGAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAATAT 291752 Query 199501 GAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTC 199560 || | ||||| || ||| ||||||||| ||||| ||||| ||| || ||| Sbjct 291751 CAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTC 291692 Query 199561 GACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAA 199620 || || | | ||| || | | ||||| ||||| ||||| || ||||| || || Sbjct 291691 TGTAGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTTACGAA 291632 Query 199621 AATTTG 199626 ||| || Sbjct 291631 AATCTG 291626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178581149915113