Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq20429 149 7e-31 seq1 140 4e-28 seq15374 136 4e-27 seq1558 131 2e-25 seq20873 113 5e-20 seq16418 102 9e-17 seq2224 87.8 2e-12 >seq20429 Length=9870158 Score = 149 bits (164), Expect = 7e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | ||| | |||||| |||| || |||||| ||||| |||||||| | Sbjct 2401386 TGCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 2401327 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || |||||||| || || || |||| | |||||| |||| | Sbjct 2401326 ACAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCGGGAG 2401267 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||||| || | | |||||||| | || | Sbjct 2401266 GGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGA 2401207 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 | || | |||||||| ||||||||||| || || |||||||| |||||| Sbjct 2401206 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATT 2401157 >seq1 Length=29265399 Score = 140 bits (154), Expect = 4e-28 Identities = 163/219 (74%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||||||| || ||| || ||||| |||||||| || ||||||||| | Sbjct 23783144 CGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCA 23783085 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || | ||||||||| || || || | ||||||||||| | || | || ||||| Sbjct 23783084 TCTTCCACCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGGGGGATCCCT-TCCTTA 23783026 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| || | || | | |||||||| | ||||| |||| |||||| Sbjct 23783025 TCCTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 23782966 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || ||||| ||||| || || |||||||||||||||||| Sbjct 23782965 GTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 23782927 >seq15374 Length=4994092 Score = 136 bits (150), Expect = 4e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| |||| || ||| || ||||| |||||||| || ||||||||| | Sbjct 172899 ACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCC 172840 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || || | ||||||||||| | || | | ||||| Sbjct 172839 ATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTT 172780 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| || | || | | |||||||| | ||||| |||| ||||| Sbjct 172779 ATCCTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGAT 172720 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||| ||||| ||||| || || ||||| |||||||||||| Sbjct 172719 GGTCTTGCCAGTCAGGGTCTTCACAAAAATTTGCATTTTG 172680 >seq1558 Length=6673444 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || || || | ||||| |||| || ||| || ||||| |||||||| || Sbjct 2790704 GCCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGA 2790645 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||||||| | || || |||||||||| || || || | |||||||| || | || Sbjct 2790644 AAGAGTGCGCCCATCTTCCAGCTGCTTGCATGCAAAGATGAGCCGCTGCTGATCAGGGGG 2790585 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||| ||| |||||| ||| | || | |||| ||| | ||||| Sbjct 2790584 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTTGCTGGGCTCCAC 2790525 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || |||||||||||||||||| Sbjct 2790524 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 2790473 >seq20873 Length=9479699 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || ||| || ||||| ||||||| || ||||||||| | || || Sbjct 8324315 ACCAGGTGCAGGGTCTACTCTTTGTGGATGCTGTAGTCAGAAAGAGTGCGCCCATCTTCC 8324374 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC-GGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| || || || | | ||||||||| || || | || || || ||| Sbjct 8324375 AGCTGCTTGCCTGCAAAGATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTTATCCTG 8324434 Query 46504 GATCTT--CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| | ||| | || | | || || || | ||||| |||| |||||||| Sbjct 8324435 AATCTTGGCCCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 8324494 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| ||||| || || |||||||||||||||||| Sbjct 8324495 TTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 8324530 >seq16418 Length=1794168 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||| | |||| || ||| || | || ||||||||||| |||||| | | || || Sbjct 1338120 CACCGGGTGCACGGTGGACTCTTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTC 1338061 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||| | ||||| || ||||||| ||| ||||||||| || | || ||||||||| Sbjct 1338060 CAGCCGTTTGCCTGCAAATATCAGACGCGGCTGGTCGG-GGGGATGCCCTCCTTGTCTTG 1338002 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || |||| || | | ||||| || | ||| || || | |||||||| || Sbjct 1338001 GATTTTGGCTTTGACGTTCTCGATGGTGTCACTGGGTTCGACCTCAAGGGTGATGGTCTT 1337942 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || || ||||| || ||||| Sbjct 1337941 GCCCGTCAGGGTCTTCACAAA-ATCTGCAT 1337913 >seq2224 Length=17281721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| || ||| |||||||| |||||||| || |||| | || | || || Sbjct 757884 ACCAGGTGCAGGGTTGACTCTTTTTGGATGTTGTAGTCAGAAAGAGCGTGCCCATCTTCC 757943 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC-GGCCGGCACGCTCTCCTTGTCCAT 46503 |||| ||| || || || || | ||||||||||| || || | || ||||| ||| Sbjct 757944 AGCTACTTACCTGCAAAGATGAGCCGCTGCTGGTCAGGAGGGGTCCCT-TCCTTATCCTG 758002 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| || | | ||||| || | ||||| |||| | |||||| | Sbjct 758003 GATCTTGGCCTTCTCATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGCGATGGTCTC 758062 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||| Sbjct 758063 GCCAGTCAGGGTCTTGACGAAAATCTGCAT 758092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565079151146280