Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20429 147 2e-30 seq15374 140 3e-28 seq1 136 4e-27 seq1558 123 2e-23 seq16418 109 5e-19 seq16984 91.5 1e-13 seq2224 82.4 8e-11 >seq20429 Length=9870158 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || |||||||| ||||||||| |||| |||||| ||| Sbjct 2401157 AATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 2401216 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | | | | | || | ||| |||| ||||| ||||| || || |||| || Sbjct 2401217 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCA 2401276 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || || |||||||| || | ||||||||| |||||||| Sbjct 2401277 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2401336 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || ||||| ||||||| ||| | ||||| ||| Sbjct 2401337 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGAGGTGGC 2401385 >seq15374 Length=4994092 Score = 140 bits (154), Expect = 3e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || || || || || ||||| ||||||||| | || || ||| || Sbjct 172681 AAAATGCAAATTTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 172740 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | ||||| | | | | | |||| || |||| || || || || || ||| | ||| Sbjct 172741 AGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCCCCTGAC 172800 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||||||||| | || ||||| |||||||| || | |||||| || |||||| Sbjct 172801 CAGCAGCGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTAC 172860 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 |||||||| || || |||| ||||| |||| |||||| || Sbjct 172861 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGTCTG 172902 >seq1 Length=29265399 Score = 136 bits (150), Expect = 4e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || || || || || ||||| ||||||||| | || || ||| || Sbjct 23782928 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 23782987 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | ||||| | | | | | |||| || |||| || || || || || ||| | ||| Sbjct 23782988 AGCGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCC-CTGAC 23783046 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||||||||| | || ||||| ||| |||| || | |||||| || |||||| Sbjct 23783047 CAGCAGCGGCTCATCTTTGCAGGCAAGCAGGTGGAAGATGGGCGCACTCTTTCTGACTAC 23783106 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || |||| |||||| |||| ||||| |||| || || Sbjct 23783107 AACATCCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGCCTGAGGGGTGG 23783156 >seq1558 Length=6673444 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || || || || || ||||| ||||||||| | || || ||| || Sbjct 2790474 AAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 2790533 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | | ||| | | | | | || | || |||| || || || || || ||| | || Sbjct 2790534 AGCAACACCATCAAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGAT 2790593 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||||||||| | || |||| |||||||| || | |||||| || |||||| Sbjct 2790594 CAGCAGCGGCTCATCTTTGCATGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTAC 2790653 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| || || |||| ||||| |||| || || ||||| || ||| Sbjct 2790654 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGGC 2790704 >seq16418 Length=1794168 Score = 109 bits (120), Expect = 5e-19 Identities = 164/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| ||||||||| | || ||||| ||| Sbjct 1337913 ATGCAGATTTT-GTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAACCCAGT 1337971 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| ||||||| ||||| ||||| || ||| ||||||| Sbjct 1337972 GACACCATCGAGAACG-TCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCC-CCGACCA 1338029 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 | ||| || || | || ||||||| |||||| || | | ||| || ||||||||| Sbjct 1338030 GCCGCGTCTGATATTTGCAGGCAAACGGCTGGAGGATGGCCACACTCTTTCCGACTACAA 1338089 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| | || || | || |||| |||||| || || ||||||| Sbjct 1338090 CATTCGGAAAGAGTCCACCGTGCACCCGGTGCTTTGTCTGTGAGGCGG 1338137 >seq16984 Length=22061292 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/214 (71%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 38258 AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG-TGCAAA 38316 ||| || |||| ||||| ||||||||| | || ||| || ||| ||||| | || || Sbjct 20913882 AAACACCCTCATCGGCAAGACCATCACCCTTGAGGTCAAGCCCAGCGACACCACTGAGAA 20913941 Query 38317 CGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTT 38376 | | || | ||| |||| |||| ||||| || ||| |||| || ||| | | || | Sbjct 20913942 TG-TCAAGGCAAAGATCCAA-ACAAGGAGGGCATCCCC-CCGATCAGCAGAAGTTGATCT 20913998 Query 38377 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAG 38436 | || || |||||||| || | ||||||||| | ||||||||||||| |||| Sbjct 20913999 TTGTCGGGAAGCAGCTGGAAGATGGGCGCACCCTGACTGACTACAACATCC---AGGAGT 20914055 Query 38437 CGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || ||||| ||||||| || | ||||| || Sbjct 20914056 CCACCCTGCACCTGGTGCTCTGTCTCAGAGGTGG 20914089 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Plus Query 38258 AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG-TGCAAA 38316 ||| || |||| ||||| ||||||||| | || ||| || ||| ||||| | || || Sbjct 20906579 AAACACCCTCATCGGCAAGACCATCACCCTTGAGGTCAAGCCCAGCGACACCACTGAGAA 20906638 Query 38317 CGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTT 38376 | | || | ||| |||| |||| ||||| || ||| |||| || ||| | | || | Sbjct 20906639 TG-TCAAGGCAAAGATCCAA-ACAAGGAGGGCATCCCC-CCGATCAGCAGAAGTTGATCT 20906695 Query 38377 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAG 38436 | || || |||||||| || | ||||||||| | ||||||||||||| |||| Sbjct 20906696 TTGTCGGGAAGCAGCTGGAAGATGGGCGCACCCTGACTGACTACAACATCC---AGGAGT 20906752 Query 38437 CGACGCTGCATTTGGTGCT 38455 | || ||||| ||||||| Sbjct 20906753 CCACCCTGCACCTGGTGCT 20906771 >seq2224 Length=17281721 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||| | |||||| || | || || ||| ||| Sbjct 758092 ATGCAGATTTTCGTCAAGACCCTGACTGGCGAGACCATCGCCCTGGAGGTGGAGCCCAGT 758033 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| || || || || | || | ||||| Sbjct 758032 GACACCATTGAGAATGAGAAGGCCAAGATCCAGGATAAGGAAGGGACCCCTCCTGACCAG 757973 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||||||||| | || || || ||||||| || | || | | || ||||||||| Sbjct 757972 CAGCGGCTCATCTTTGCAGGTAAGTAGCTGGAAGATGGGCACGCTCTTTCTGACTACAAC 757913 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| || | || ||||| |||| || | ||||| || ||| Sbjct 757912 ATCCAAAAAGAGTCAACCCTGCACCTGGTCCTCTGCTTGAGGGGTGGC 757865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500031882565760