Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq15718 132 1e-25 seq20873 120 7e-22 seq2224 118 2e-21 seq16418 113 1e-19 seq2891 107 4e-18 seq15540 98.7 2e-15 seq7335 89.7 1e-12 >seq15718 Length=2773767 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| Sbjct 1504873 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1504932 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || || || |||| ||| || || |||||||| ||||| Sbjct 1504933 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1504992 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || || ||||| ||| || | || || Sbjct 1504993 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTG 1505052 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | |||||||| || | ||||| Sbjct 1505053 ATAGTCTTCCCTGTAAGGGTTTTTACAAAAATCTGCAT 1505090 >seq20873 Length=9479699 Score = 120 bits (132), Expect = 7e-22 Identities = 159/217 (73%), Gaps = 9/217 (4%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||||| || || |||| || | |||||| | ||||||||| Sbjct 8324315 ACCAGGTGCAGGGTCTACTCTTTGTGGATGCTGTAGTCAGAAAGAGTGCGCCCATCTTCC 8324374 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGA-ATGCCTTCTTTGTCTTG 195050 |||||||| ||||| ||||| || | || ||||| || || ||||||||||| || || Sbjct 8324375 AGCTGCTTGCCTGCAAAGATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTTATCCTG 8324434 Query 195051 AATTTTTTGC--TTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACC 195105 ||| || | || || ||||||||||| || ||| ||||| || ||||| | Sbjct 8324435 AATCTTGGCCCCTTCACATTCTCAATGGTATC---ACTGGGCTCCACCTCCAGGGTGATG 8324491 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| || |||| || || || || | |||||||| Sbjct 8324492 GTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTT 8324528 >seq2224 Length=17281721 Score = 118 bits (130), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||||||||| || ||||| || | ||||| ||||||||| Sbjct 757884 ACCAGGTGCAGGGTTGACTCTTTTTGGATGTTGTAGTCAGAAAGAGCGTGCCCATCTTCC 757943 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||| ||||||||| ||||| || || || ||||| ||||| | ||||| || || || Sbjct 757944 AGCTACTTACCTGCAAAGATGAGCCGCTGCTGGTCAGGAGGGGTCCCTTCCTTATCCTGG 758003 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| | |||||||||||||| ||| ||||| || |||| | ||| Sbjct 758004 ATCTTGGCCTTCTCATTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGCGATGGTC 758060 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || |||| || || ||||| | ||||| Sbjct 758061 TCGCCAGTCAGGGTCTTGACGAAAATCTGCAT 758092 >seq16418 Length=1794168 Score = 113 bits (124), Expect = 1e-19 Identities = 146/199 (73%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 194936 GGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCT 194995 |||| | ||||||||||| |||| ||||| |||| |||||| ||||| || ||| Sbjct 1338115 GGTGCACGGTGGACTCTTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCC 1338056 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 | || ||||| || || || || | ||||| || ||| |||| || |||||||| |||| Sbjct 1338055 GTTTGCCTGCAAATATCAGACGCGGCTGGTCGGGGGGA-TGCCCTCCTTGTCTTGGATTT 1337997 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||||||||||| |||||||| ||| ||| || |||||||| | ||||| | Sbjct 1337996 TGGCTTTGACGTTCTCGATGGTGTC---ACTGGGTTCGACCTCAAGGGTGATGGTCTTGC 1337940 Query 195113 CTGTCAAAGTTTTTACGAA 195131 | |||| || || || || Sbjct 1337939 CCGTCAGGGTCTTCACAAA 1337921 >seq2891 Length=6317780 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||||||||||||| |||| |||||||| ||| | || ||||| | Sbjct 1420471 AGTCTCAACACAAGGTGAAGAGTGCACTCCTTTTGAATGTTGCAGTC----AGAGTACAT 1420416 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || || || |||| ||| || || |||||||| ||||| Sbjct 1420415 CCATCTTCCAGTTGCTTGCCAGCAAAAATTAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1420356 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074 || || || || || ||| || || || || Sbjct 1420355 TTATCCTGGATCTTAGCCTTTACATTTTCTAT 1420324 >seq15540 Length=10794444 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/226 (70%), Gaps = 11/226 (5%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| ||||| | |||||||||||| |||||||| ||| | || | ||| Sbjct 10655369 GAGTCTCAACACAAGATTAAGAGTGGACTCCTTTTGAATGTTGCAGTC----AAAGTATG 10655424 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || ||||| || || || || |||| ||| ||||| || ||||| ||||| Sbjct 10655425 TCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGGTGGAATTCCTTC 10655484 Query 195042 TTTGTCTTGAATTTTTTGCTTGAC--GTTCTCA-----ATGGTGTCCGAACTTTCCACTT 195094 | || || || || ||| || |||||| || || ||||| ||| || | Sbjct 10655485 CCTATCCTGGATCTTGGCCTTTACATTTTCTCAGATACATTGTATCCGAGGGTTCAACCT 10655544 Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | | ||||| ||| | ||||| Sbjct 10655545 GGAGAGTGATGGTCTTCCCTGTAAGGGATTTTATGAAAATCTGCAT 10655590 >seq7335 Length=6127795 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| ||||| | |||||||||||| ||||||| ||||| || | ||| ||| Sbjct 5714276 CTCAACACAAGATAAAGAGTGGACTCCTTTTGAACTTTGTAGTCAGACAGAAAATGTCCA 5714335 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || || || || || ||| | ||| ||| || || |||||||| |||| || Sbjct 5714336 TCTTCTAGGTGTTTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTTA 5714395 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || || ||||| ||| | || || || || ||| ||| |||| || || | Sbjct 5714396 TCCTGGATTTTGGCCTTCATATTGTCTATTGTATCCAGGGGTTCAACTTTGAGAGTGATG 5714455 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || ||||| | | ||||| ||| | ||||||| Sbjct 5714456 GTTTTCCCTGTAAGGGCTTTTATGAAAATCTGCATTT 5714492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109161202863413