Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq15718 114 1e-20 seq16418 93.3 3e-14 >seq15718 Length=2773767 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || || || ||||| || ||||| || | | ||| |||| Sbjct 1504879 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCT 1504938 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 |||| |||||| || ||||| |||| | || ||||| || ||||| ||||| ||||| Sbjct 1504939 TCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 1504998 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| |||||| || || || | ||| || | ||||||| || Sbjct 1504999 TGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGTC 1505058 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || | ||||||||||| ||||||||| Sbjct 1505059 TTCCCTGTAAGGGTTTTTACAAAAATCTGCATG 1505091 >seq16418 Length=1794168 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 101272 GGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACC 101331 ||| || ||||| | || ||||| |||| | ||| | |||| |||| | || || Sbjct 1338108 GGTGGACTCTTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCC 1338049 Query 101332 TGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTT 101391 ||||||||||| |||| | || ||||| || ||||| || || ||||| ||||| ||| Sbjct 1338048 TGCAAATATCAGACGCGGCTGGTCGGG-GGGATGCCCTCCTTGTCTTGGATTTTGGCTTT 1337990 Query 101392 TACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451 || | || | |||||| | ||| || ||||| |||| || ||||| || | || Sbjct 1337989 GACGTTCTCGATGGTGTCACTGGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGT 1337930 Query 101452 TTTTACAAATATCTGCAT 101469 || ||||| |||||||| Sbjct 1337929 CTTCACAAA-ATCTGCAT 1337913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396169544676423