Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2225 91.5 3e-13 seq19918 87.8 3e-12 >seq2225 Length=8022615 Score = 91.5 bits (100), Expect = 3e-13 Identities = 297/447 (66%), Gaps = 22/447 (5%) Strand=Plus/Minus Query 25596 CGTGTT--GGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG-AGAG 25652 |||||| ||| ||||||||||| ||| || | ||| || || || ||| | | || | Sbjct 9959 CGTGTTCTGGCTTTCTTTGCAGCAAGTGACGGCAGAGTAAATGACAA-CTGGGTGGAGCG 9901 Query 25653 ATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 |||| | ||||| ||| ||| || ||| | |||||||| || ||||| || ||| Sbjct 9900 TTTCAGCCAAGAAGTTCAGATTACA--GAAGCCCACTGTTTCTATGGCTTCCAAATTGCC 9843 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG-ACGTACATTACAGACGT 25769 | |||| | | |||||| ||||| || | || ||| || |||||| ||| | Sbjct 9842 ACGTAAAACATACCTTCTGAGATGTAT----AGTTGCTTATGGAC--ACATTAAAGATTT 9789 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 | || || || || || | ||||| || | || || | |||| |||||| Sbjct 9788 CAAAGAAAGGGAATTTCTCTTCAGCGCCATTGAAATGCTGCCTTGCGTGAAGAAGAAGGC 9729 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAG 25888 |||||| || |||| | | || || | || | | | | | | | || Sbjct 9728 AGATTGGGCCTTGCGTTGGA-CTGGGGACAAAGAGGCTGCCTA---CCAACATGTTGCAG 9673 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || ||||| |||||||| || | |||| ||||| | || |||||||||| Sbjct 9672 CCTTTGCCGCAGTGGAAGGCATCTTCTTTTCCTGTTCATTTGCATCAATGTTCTGGCTCA 9613 Query 25949 AGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | |||||| |||||| || |||| | | || || || ||||| || ||| Sbjct 9612 AGAA-ATGGGGACTGATGCCCCACCTCACATTTTACTATGAACTTATTAGCAGAGATGAG 9554 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| | ||| | || |||||||||||| Sbjct 9553 GGTTTACACTGTGACTTTGCCTGCCTG 9527 >seq19918 Length=441265 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| |||||||| || ||||| ||||| | || |||||| Sbjct 48807 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 48748 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| | | | |||| |||||||| || |||||||| || || || ||||| || Sbjct 48747 CTCAAG-AAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 48689 Query 26004 CGAGG 26008 |||| Sbjct 48688 TGAGG 48684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928583109588160