Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq15196 342 6e-89 seq15718 170 2e-37 seq20095 95.1 1e-14 seq19651 93.3 5e-14 seq15663 91.5 2e-13 >seq15196 Length=3550818 Score = 342 bits (378), Expect = 6e-89 Identities = 667/982 (68%), Gaps = 5/982 (1%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 ||||||||| |||| ||| |||| ||| || ||| ||||| ||||||| ||||| || Sbjct 812079 CAGATGTTCATCCAAACACTGGATGGCAAAGTGGTCGACGTCCACGTCGAACTTATTGGC 812020 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || |||||| | || || | ||| || Sbjct 812019 AAACAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCTCCAGCTCCAAAAATGCACAC 811963 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 || || | ||| ||||| | ||| || ||||| |||| || || | | |||||| || Sbjct 811962 CGAGCGCACGTGGACGCCATCGCAGGGTGGGTAGGGAGCACCCTTAGAGATGTCACCCTC 811903 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||||||| ||||||||||| | ||||||||||| || |||||| || | Sbjct 811902 ATAGTACTGCCACTTGACAAACCTGGCAACTGCCTGCATGTCAGACAAGTCGTACTTATG 811843 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 ||| || | | || || || | || || | || | |||||||| || | || Sbjct 811842 GCTCAAGGAGAGAGAGCCAGGGACTTCCGGGATCCTTTGGATAGTGGCCCAGAGATACTC 811783 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| ||||||| | ||| ||||| |||| | |||| | | || Sbjct 811782 ATCCGGGCTGTAGGTGTCCTGCGCCCACTCCATAAACTTTTGGATTTTTTCATTCTCTAG 811723 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | ||||| ||| | || ||||| || || ||||| || || | ||| | Sbjct 811722 CACATACCCCACGTACTCCCTGCTGACCACAAAATAGGCACTGCCTGAAAAAAGAGGTGT 811663 Query 160472 GGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530 | || || || | |||| | || ||||| | || | ||| || || | | Sbjct 811662 TTCAAGTGGAGGACGCAT-TTTGACAGTCCCCGTGTTGGTCAGCTTTCCATTAACAACTG 811604 Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590 | | ||||| |||||||| | || | | ||||| || || || || ||| Sbjct 811603 CATACCGCTTTTTCCACCTTTCTTCTTTATTGGAGGGCATCTTCTCGGTTTCAAGGTTGT 811544 Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650 | |||| || ||| || |||| | |||| || |||||||| || || | ||||| | Sbjct 811543 TTTCACCCATGAACGACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAATAGGAAAAT 811484 Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710 | ||||||| | ||||| | ||||||||| || |||| || |||||| ||| Sbjct 811483 CCATACCGCAAAGATTTATTAAGTACTTCCAGGGTGCACTCATTCTGTAGAGGTCCTTCA 811424 Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770 |||| || | ||| ||||| || || ||||| || || || || || |||| || | || Sbjct 811423 TGCAGTTGAGATCGGCCTGAACCCGACTCCAAGATGCATAAACCACACTCTCCAGCTGAC 811364 Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCT 160830 ||||||| ||||| ||| |||||| ||| | || |||| ||| || ||||| || Sbjct 811363 TGGCCACGAAGACATTACTGAAACAGGACGCAATGCCCATCACTGCAGCTAAGAAGGACT 811304 Query 160831 TATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGA 160890 || | |||| ||||||||| | |||||| | ||||||||| ||||||||||| | Sbjct 811303 CCTCTGATTTTCTGTCCACGTGAATGCAATAGAAATTCTGAGGCATATAGATGGCCCTCA 811244 Query 160891 GCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACT 160950 | | ||| || | ||| || || || ||||| | ||| ||||| || ||||| ||||||| Sbjct 811243 GGAGCCTGTCCAGCATTTCAATTTTGTGATGAACCACTATAGAATATGCTATTGGAAACT 811184 Query 160951 CGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCAC 161010 | ||| || ||| |||| | | | || || ||| ||||||| ||| || | Sbjct 811183 GCGCCTCTTCTTTACTAAGGGGTTCCATAATATATTTGCGCCTCTTGATGAAAGAAGTGC 811124 Query 161011 AATCCCGCGTCATGTTGATATA 161032 | || |||||||| || || Sbjct 811123 AGTCAGTGGTCATGTTTATGTA 811102 >seq15718 Length=2773767 Score = 170 bits (188), Expect = 2e-37 Identities = 214/294 (73%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 168150 TATAGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCAC 168209 || || || | ||| | | |||| || ||||| || | || || | |||||||| ||| Sbjct 2253394 TAGAGGGTGAGGCAGGCTGTTCCTGAGATCTTCCCATAACCAAAGATATTGAAGAGACAC 2253453 Query 168210 ATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGG 168269 ||| | || ||||| ||||||| |||||||||||| || || | ||||||||| |||| Sbjct 2253454 ATGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAAGGTGATAGTTGAGTTTTGGAGT 2253513 Query 168270 CCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTC 168329 |||| || || ||||||| | | ||||| | ||| || |||||||| || ||| | Sbjct 2253514 CCCAGCTCAGTGATGTTCATCCTGTTCTTATAGGCAGGCTGGACTACAACACCATGGAGC 2253573 Query 168330 TCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATC 168389 || ||||||||||||||||| || ||||| || ||||| | |||||||| || || | | Sbjct 2253574 TCACTGAAGGTGGCCATGTTTTCTGGGCTTGTAGCCTTCTTTTTCTGCCATGTCACAACC 2253633 Query 168390 AGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGC 168443 | || || | | | || || ||||| | ||||| || ||||||||| Sbjct 2253634 AAGACATCCTGGAAACTTTTCAAAGAGCATCTTATGGAAGCAGGTGTGTTCAGC 2253687 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957 || ||||| |||| ||| || |||| ||| | |||||| || || || || ||||| Sbjct 2250904 GTCACAGTCCCCAGATGCAGCACCTGGCAGACCACCTCC---TTCCCCACCTGTCTCTTG 2250960 Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017 || ||||| || || | ||||| || ||| ||| || ||||| | | || | | | Sbjct 2250961 GGGTCTTTGACCTGGAGGATGCTGGTAACAGATGTGGTCCCATTTGGGT-TAGAGAGAAT 2251019 Query 168018 TTC-GTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCG 168076 || || || || |||||||||||||| ||||||||| | | | ||| || || || Sbjct 2251020 CTCAGTACTATTTTCAATCCCTGATCCACGGACCTTCCAGGAGACCAGAGGGGCTGGGCG 2251079 Query 168077 TGCTGTAGCAGAGCAGGTAATATTTA 168102 || || |||||||| || ||||||| Sbjct 2251080 GGCAGTGGCAGAGCAAGTGATATTTA 2251105 >seq20095 Length=5702321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 207/306 (68%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 ||||| || |||| |||| ||||||| |||||||| | || || | | | ||| Sbjct 5702194 GGAAAATCCATACCACACAGATTTATCAAGTACTTCCTGTCTGCACTTACCATGAG-AGG 5702136 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 ||| ||||||| || | || |||| || || || ||| | || || || || | Sbjct 5702135 TCCTTCATGCAGTTGAGGTCAGCCTA-ACCCGACTTGGGGATACATAAACCACACTCCCC 5702077 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | ||||||||||||||||||| |||||| |||| || |||| |||||| ||| Sbjct 5702076 AACTGACTGGCCACAAAGACGTTACTGAAACAGGACATAATGCCCATCACCGCAGCTAAG 5702017 Query 160824 AACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATG 160883 || || || | ||| |||||| | | ||| || | |||| ||| || ||| Sbjct 5702016 AAGGACTCCTCTGATTTTTTGTCCACACGAATGCAGTAGAAATTCTACGGCATATACATG 5701957 Query 160884 GCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATC 160943 |||| || | ||| || ||| || || || ||||| | ||| | ||| | ||||| Sbjct 5701956 ACCCTCAGGAGCCT-TCACCCATTTCAATTTTGTGATGAACCACTACAGAAGATGCTATT 5701898 Query 160944 GGAAAC 160949 |||||| Sbjct 5701897 GGAAAC 5701892 >seq19651 Length=6732134 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| || |||| |||| || |||| |||||| | ||||| || |||| | || | Sbjct 932834 AGATACTTCGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 932775 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || || ||||| |||| || || || || | ||| | ||||| | | || Sbjct 932774 GGAATATAATTCTCATAGTTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCC 932715 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411 | || | ||| | |||||||| |||||| || |||| |||||||||||||| | Sbjct 932714 AGAAAAGCATTGTAAAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAA 932655 Query 176412 AAATAGAACTTACA 176425 | ||| || ||||| Sbjct 932654 AGATAAAATTTACA 932641 >seq15663 Length=1857241 Score = 91.5 bits (100), Expect = 2e-13 Identities = 207/306 (68%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 ||||| || ||||||||| ||||||| |||||||| | || || | | | ||| Sbjct 1841049 GGAAAATCCATACCGCACAGATTTATCAAGTACTTCCTGTCTGCACTTACCATGAG-AGG 1841107 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 ||| ||||||| || | || |||| || | || ||| | || || || || | Sbjct 1841108 TCCTTCATGCAGTTGAGGTCAGCCTA-ACCTGACTTGGGGATACATAAACCACACTCCCC 1841166 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||||||||||||||||||| |||||| |||| || |||| ||| | ||| Sbjct 1841167 AACTGACTGGCCACAAAGACGTTATTGAAACAGGACATAATGCCCATCACTGTAGCTAAG 1841226 Query 160824 AACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATG 160883 || || || | ||| |||||| || | |||||| | |||| ||| || ||| Sbjct 1841227 AAGGACTCCTCTGATTTTTTGTCCACATGAATGCAATAGAAATTCTATGGCATATACATG 1841286 Query 160884 GCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATC 160943 |||| || | ||| || ||| || || || |||| || ||| | ||| | |||| Sbjct 1841287 ACCCTCAGGAGCCT-TCACTCATTTCAATTTTGTGAT-GAACACTACAGAAGATACTATT 1841344 Query 160944 GGAAAC 160949 |||||| Sbjct 1841345 GGAAAC 1841350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577056575705640