Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14041 84.2 1e-11 >seq14041 Length=6761596 Score = 84.2 bits (92), Expect = 1e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | ||| |||||||| | ||| | || | ||| || || | | |||||| || Sbjct 1430294 CATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGTTCTTCCTT 1430353 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 ||| ||| ||||| |||| ||| | ||| ||||| || ||||| ||||| ||||| | | Sbjct 1430354 TCCTGTG-TTCTTCTTTAAATCAAGGAACTCAAAGATGTCTGAATGCCAAGGTTCCAGGT 1430412 Query 26052 AGATAGCAAA 26061 |||||||||| Sbjct 1430413 AGATAGCAAA 1430422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252970491414425