Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15718 122 2e-22 seq20862 96.9 6e-15 seq7335 93.3 8e-14 >seq15718 Length=2773767 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || ||| || Sbjct 1504882 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCC 1504941 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || |||||||| | ||| || ||||||||||| |||||||| ||||| || Sbjct 1504942 AGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 1505001 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||||| | ||||| ||||| || Sbjct 1505002 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGTCTTC 1505061 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || ||||||||||| || ||||| || Sbjct 1505062 CCTGTAAGGGTTTTTACAAAAATCTGCATGTT 1505093 >seq20862 Length=464634 Score = 96.9 bits (106), Expect = 6e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || || ||||| || | ||| || ||||||||||| |||||||| || Sbjct 291778 ATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 291719 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| ||||||| || | ||||| | ||||| || Sbjct 291718 ATCCTGGATCTTGGCCTTTACATTTTCTGTAGTATCCGAGGGTTCAACCTTGAGAGTGAT 291659 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || || || || || |||||||| || || || Sbjct 291658 GGTCTTCCCCGTAAGGGTTTTTACGAAAATCTG 291626 >seq7335 Length=6127795 Score = 93.3 bits (102), Expect = 8e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| |||| ||||| || ||||| | | | | || ||||||||||| ||| |||| || Sbjct 5714335 ATCTTCTAGGTGTTTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTT 5714394 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || ||||||| || ||||| || ||||| | ||||||| ||||| || Sbjct 5714395 ATCCTGGATTTTGGCCTTCATATTGTCTATTGTATCCAGGGGTTCAACTTTGAGAGTGAT 5714454 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || | ||||| || || |||||||| Sbjct 5714455 GGTTTTCCCTGTAAGGGCTTTTATGAAAATCTGCATTTT 5714493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899400933618480