Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq16785 93.3 1e-13 >seq16785 Length=2579918 Score = 93.3 bits (102), Expect = 1e-13 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 302616 AGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAG 302675 || ||| || |||||||| || || || || |||| || ||||| ||||||||||| | Sbjct 2020782 AGCTGTCTTGACAGCTGTGTCGATGAGCCCCTCACGGCCCCCCATGGCATGGAAGAAGAA 2020841 Query 302676 CTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGA 302735 ||| ||| || || | | ||||| |||| || || ||||| ||||||| Sbjct 2020842 CTCAGTGGGTGTGAGGCCAGCCAGGTAGGAGTTCTCCACAAAGCCACGGCTCTCGGGCCC 2020901 Query 302736 ATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTT 302795 || || |||| | ||||| ||||| || | || || | || |||| || ||||| Sbjct 2020902 ATAATCATCCTTGATGAAGTGAGGCAGAGTTCGGTGCTTGAACCCAAATGGAATCCGCTT 2020961 Query 302796 TCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCATCTGCGAAA 302839 || || ||||||||||| |||| ||| | ||| | ||| |||| Sbjct 2020962 GCCCTCCACGTTCTGCTG-CCCAACCACAGCAATGACCTGGGAAA 2021005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471392567133643