Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq20429 136 4e-27 seq15718 134 1e-26 seq16984 89.7 5e-13 seq16418 86.0 6e-12 >seq20429 Length=9870158 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || || || || || || || || ||||| || || || Sbjct 2401155 ACAATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCC 2401214 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || ||||||||||||||| || || || ||||||||| Sbjct 2401215 AGCGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCCGAT 2401274 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||| ||||| |||||||| ||| | | | | |||| || || Sbjct 2401275 CAGCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 2401334 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || ||||| || || || ||| ||||| Sbjct 2401335 AACATCCAGAAGGAGTCCACCCTGCACCTGGTG 2401367 >seq15718 Length=2773767 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || || ||||| || ||| | || ||| || | Sbjct 1505090 ATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACTATCACTCTCAAGGTTGAACCCTCG 1505031 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 1505030 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1504971 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882 ||| | |||| ||||| || || || ||||| ||| || | || | ||| || || || Sbjct 1504970 CAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACAA 1504912 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || || | |||||| || | || || || Sbjct 1504911 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1504864 >seq16984 Length=22061292 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||| || | | || || || || || || || || || ||||| || || ||| Sbjct 20914090 GATGCAGAGCTCTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAG 20914149 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| || | || || ||||||||||||||| ||||| | || ||| ||| Sbjct 20914150 CGACACCACTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCACCCCCCCCCGTCA 20914209 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || | ||||||||||| |||||| ||||||| ||| Sbjct 20914210 GCAGAGGTTGATCTTTGCTGGGAAATAGCTGGAAGAT 20914246 >seq16418 Length=1794168 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || || || || || || || || || ||| ||| Sbjct 1337912 GATGCAGAT-TTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAACCCAG 1337970 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | ||| ||||||||||| || || || || ||||| | Sbjct 1337971 TGACACCATCGAGAACGTCAAAGCCAAA-ATCCAAGACAAGGAGGGCAT-CCCCCCGACC 1338028 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 | | ||| |||| ||||| || |||| |||||||||| Sbjct 1338029 AGCCGCGTCTGATATTTGCAGGCAAACGGCTGGAGGAT 1338066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449770846974920