Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq15718 123 2e-23 seq20862 93.3 3e-14 >seq15718 Length=2773767 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | || | ||| Sbjct 1504878 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATC 1504937 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 1504938 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1504997 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || | ||||| ||||| Sbjct 1504998 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATAGT 1505057 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| ||||| |||||||| || Sbjct 1505058 CTTCCCTGTAAGGGTTTTTACAAAAATCTGCATGTT 1505093 >seq20862 Length=464634 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 29599 TTTTGAATGTTATAATCCGCAATG--GTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 ||||||||||| || || | ||| || | ||| || ||||| ||||||||| ||| Sbjct 291810 TTTTGAATGTTGTAGTCAG--ATGAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAATA 291753 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||| |||||||||||| || ||||| || || || || || | || || ||| ||| Sbjct 291752 TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTT 291693 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 || ||| || || |||| || | ||||| || || || || || | |||||| || | Sbjct 291692 CTGTAGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTTACGA 291633 Query 29777 ATATCTG 29783 | ||||| Sbjct 291632 AAATCTG 291626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385113382572999