Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq20429 89.7 5e-13 >seq20429 Length=9870158 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/119 (78%), Gaps = 6/119 (5%) Strand=Plus/Minus Query 163 AGTCCACACACAAGATACAAAACAGGTTATCAGAAAA-ATTCAGTATAATTTATTAAATA 221 ||||| | ||||| || |||||||| |||| |||||| | ||| ||||||||||||||| Sbjct 4438561 AGTCCCCTCACAAAATCCAAAACAGATTATGAGAAAATAATCAACATAATTTATTAAATA 4438502 Query 222 ATTTTCAAGGGCTTCTTTAAGAAGCATTAACAA-TCTAACAACATTTTATAAATAACAA 279 | || ||| |||| || ||| ||||||||||| ||| | ||| ||||||| ||| Sbjct 4438501 AATTCCAAAGGCTCCTCCAAGTAGCATTAACAACTCTTAGTACA----ATAAATATCAA 4438447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438436441202000