Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq20429 141 9e-29 seq15374 127 2e-24 seq1 122 8e-23 seq1558 118 1e-21 seq16418 109 5e-19 seq2224 109 5e-19 seq20873 98.7 1e-15 seq16984 91.5 1e-13 seq20430 82.4 7e-11 >seq20429 Length=9870158 Score = 141 bits (156), Expect = 9e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || || ||| | || || |||||||| || Sbjct 2401355 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTCCC 2401296 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| |||||| |||||||||||||| |||||||| ||||||| ||| Sbjct 2401295 AGCAAAGATCAGCCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTTGCCTT 2401236 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| ||||||| || |||| ||||| ||| ||||| ||||| || Sbjct 2401235 GACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGT 2401176 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 2401175 CTTCACAAAGATCTGCAT 2401158 >seq15374 Length=4994092 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||||||||| || ||||| || | ||| | || || ||||||||||| Sbjct 172881 GGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCCAGCTGCTTGCC 172822 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||||||||||||| || ||||| |||||||| || |||||| || Sbjct 172821 TGCAAAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTTATCCTGGATCTTGGCTTT 172762 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | |||||| |||||||||| || | ||||| ||| ||||| ||||| || Sbjct 172761 CACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 172702 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 172701 CTTCACAAAAATTTGCAT 172684 >seq1 Length=29265399 Score = 122 bits (134), Expect = 8e-23 Identities = 150/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||||||||| || ||||| || | ||| | || || | ||| Sbjct 23783133 ATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCCACCTG 23783074 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | ||||||||||||||||| || ||||| |||||||| || |||||| Sbjct 23783073 CTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGG-GGGATCCCTTCCTTATCCTGGATCTT 23783015 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | | ||| | |||||| |||||||||| || | ||||| ||| |||||||| Sbjct 23783014 GGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGT 23782955 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || || ||||| Sbjct 23782954 CAGGGTCTTCACAAAGATTTGCAT 23782931 >seq1558 Length=6673444 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||||||||| || ||||| || | ||| | || || |||||||||| Sbjct 2790674 GGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCCAGCTGCTTGCA 2790615 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | |||||||||||||| || || |||||||||||||| || |||||| ||| Sbjct 2790614 TGCAAAGATGAGCCGCTGCTGATCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTT 2790555 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||| | |||||||||| || | ||||| ||| ||||||||||| || Sbjct 2790554 CACATTCTTGATGGTGTTGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 2790495 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 2790494 CTTCACAAAGATTTGCAT 2790477 >seq16418 Length=1794168 Score = 109 bits (120), Expect = 5e-19 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||| | || ||||| ||| | ||| | | | ||||| ||| | |||| Sbjct 1338108 GGTGGACTCTTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCA-TCCTCCAGCCGTTTGC 1338050 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||| |||||||||| |||||||| |||||||| ||| ||| || Sbjct 1338049 CTGCAAATATCAGACGCGGCTGGTCGGG-GGGATGCCCTCCTTGTCTTGGAT-TTTGGCT 1337992 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | ||||| |||| || || || | ||||| ||| ||||| ||||| Sbjct 1337991 TTGACGTTCTCGATGGTGTCACTGGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGG 1337932 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || ||||||||||| Sbjct 1337931 GTCTTCAC-AAAATCTGCAT 1337913 >seq2224 Length=17281721 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| |||||||| || || ||||| || | | | | || || |||| ||| || Sbjct 757895 GGTTGACTCTTTTTGGATGTTGTAGTCAGAAAGAGCGTGCCCATCTTCCAGCTACTTACC 757954 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||||||||||||| |||||| | |||||||| || |||||| ||| Sbjct 757955 TGCAAAGATGAGCCGCTGCTGGTCAGGAGGGGTCCCTTCCTTATCCTGGATCTTGGCCTT 758014 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||||| ||||| |||||||||| || | || || ||| | ||| ||||| || Sbjct 758015 CTCATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGCGATGGTCTCGCCAGTCAGGGT 758074 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 758075 CTTGACGAAAATCTGCAT 758092 >seq20873 Length=9479699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTC-GGGAGGGATGCCTTCCTT 133564 || || ||||||||||| || | ||||||| ||||||||| ||| ||||||||||| || Sbjct 8324369 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTT 8324428 Query 133565 GTCGGTGATCTTTTGC--TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTG 133622 || ||||| | || | | ||||| || || |||||||||| || | |||| Sbjct 8324429 ATCCTGAATCTTGGCCCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTG 8324488 Query 133623 ACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||| ||||||||||| || || || || || ||||| Sbjct 8324489 ATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 8324526 >seq16984 Length=22061292 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||| || || || | || | || |||||| ||| ||| ||||||||||| Sbjct 20914245 TCTTCCAGCTATTTCCCAGCAAAGATCAACCTCTGCTGACGGGGGGGGGTGCCTTCCTTG 20914186 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||||| | |||| |||||| ||||||| || |||| ||||| | Sbjct 20914185 TCTTGGATCTTTGCCTTGACATTCTCAGTGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 20914126 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| || || || | ||||||| Sbjct 20914125 GTCTTGCCAGTCAGGGTCTTCACAGAGCTCTGCAT 20914091 >seq20430 Length=457578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 133538 CTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGT 133597 ||| || || ||||||| |||||||||||| | ||| | ||||| | ||||| || Sbjct 387521 CTGGTGATCAGGAGGGACGCCTTCCTTGTCTTGGCTCTCTGCCTTGACATTCTCAATGGT 387462 Query 133598 GTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTG 133657 ||| ||||||| || || | ||||| || ||||| ||||| || || || || ||||| Sbjct 387461 GTCACTGGGCTCGACCTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTG 387402 Query 133658 CAT 133660 ||| Sbjct 387401 CAT 387399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483284602232360