Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq14341 98.7 3e-17 seq14008 98.7 3e-17 seq11334 98.7 3e-17 seq20429 95.1 4e-16 seq14097 95.1 4e-16 seq1336 84.2 7e-13 seq8445 82.4 2e-12 >seq14341 Length=4442307 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1547590 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1547531 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1547530 CCGGGTTTCGGC 1547519 >seq14008 Length=4437084 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3731001 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3730942 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3730941 CCGGGTTTCGGC 3730930 >seq11334 Length=3727978 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1223385 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1223444 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1223445 CCGGGTTTCGGC 1223456 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1229706 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1229765 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1229766 CCGGGTTTCGGC 1229777 >seq20429 Length=9870158 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2390682 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2390741 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 2390742 CCTGGTTTCGGC 2390753 >seq14097 Length=3516910 Score = 95.1 bits (104), Expect = 4e-16 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | Sbjct 2485534 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 2485593 Query 2836 TCAGC 2840 || || Sbjct 2485594 TCGGC 2485598 >seq1336 Length=4842043 Score = 84.2 bits (92), Expect = 7e-13 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2106552 AAATAGCACAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2106502 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2106361 AAATAGTACAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2106311 >seq8445 Length=4881515 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||| |||||||||||||||| |||||||||||||||| | |||||| |||||||| Sbjct 3079634 GCTGAAATAGCTCAGTTGGGAGATCATTAGACTGAAGATCCACAGGTCCATGGTTCAA 3079577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845692751655