Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq15718 98.7 9e-16 >seq15718 Length=2773767 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||||||||| | ||||||||||| | || || || | ||||| || | || ||| | Sbjct 1505094 CAACATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACTATCACTCTCAAGGTTGAACC 1505035 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | ||||| || || ||||| || || || || || || Sbjct 1505034 CTCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1504975 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGA-AATGTCAGCGAT 25348 |||||||||||| |||| | ||||| ||||| |||||| || | | |||| || Sbjct 1504974 TCAGCAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTC--TGAC 1504917 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| |||||||| || ||||| ||||| | ||||| ||| Sbjct 1504916 TACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 1504875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444969000216480