Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq1558 82.4 6e-11 >seq1 Length=29265399 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| | ||||| | Sbjct 23783144 CGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCA 23783085 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||| || || || | ||||| ||||| || || || || | || || ||| Sbjct 23783084 TCTTCCACCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGGGGGATC-CCTTCCTTA 23783026 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| ||||| | || | ||||| ||| || || || || || || Sbjct 23783025 TCCTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 23782966 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| ||||| || ||||||||||||||||| Sbjct 23782965 GTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 23782931 >seq1558 Length=6673444 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || | ||| || | |||| || | || || ||||| || || |||||||| Sbjct 2790704 GCCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGA 2790645 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||||| | ||||| ||||| || | || | ||||| ||||| ||||| || || Sbjct 2790644 AAGAGTGCGCCCATCTTCCAGCTGCTTGCATGCAAAGATGAGCCGCTGCTGATCAGGGGG 2790585 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || ||||| ||||||| |||| | | | |||| ||| || || Sbjct 2790584 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTTGCTGGGCTCCAC 2790525 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| ||||| || ||||||||||||||||| Sbjct 2790524 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 2790477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424817673043368